RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SPPL2CQ8IUH8 684 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 FAM9CQ8IZT9 166 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 LIX1Q8N485 282 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 MARVELD2Q8N4S9 558 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 BEND7Q8N7W2 519 aaPredicted RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 SELENOMQ8WWX9 145 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ATL1Q8WXF7 558 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 EME1Q96AY2 570 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 TMEM159Q96B96 161 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 DTD2Q96FN9 168 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ELOVL6Q9H5J4 265 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 EPHX3Q9H6B9 360 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 INTS7Q9NVH2 962 aaKnown RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 SLAMF8Q9P0V8 285 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 DHRS12A0PJE2 317 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 SLC5A10A0PJK1 596 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 GRXCR1A8MXD5 290 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 NPIPB8E9PQR5 432 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 RSL1D1O76021 490 aaKnown RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PDYNP01213 254 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 IL6P05231 212 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 UMPSP11172 480 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PRPS2P11908 318 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PRPH2P23942 346 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 FSHRP23945 695 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ZNF33BQ06732 778 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PDGFRLQ15198 375 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 GAB4Q2WGN9 574 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 C9orf64Q5T6V5 341 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 OR52E8Q6IFG1 317 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 NEK5Q6P3R8 708 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ZNF765Q7L2R6 523 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ERMP1Q7Z2K6 904 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ANKFN1Q8N957 763 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 CGREF1Q99674 301 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 THG1LQ9NWX6 298 aaKnown RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 MYO7AQ13402 2215 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 HEPACAM2A8MVW5 462 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 TSPAN6O43657 245 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 KCNH1O95259 989 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 CATP04040 527 aaKnown RBP16.27■□□□□ 0.19
SAMM50-201ENST00000350028 BMP2P12643 396 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 ZNF26P17031 533 aaPredicted RBP16.27■□□□□ 0.19
SAMM50-201ENST00000350028 PSMA4P25789 261 aaKnown RBP16.27■□□□□ 0.19
SAMM50-201ENST00000350028 CLCN2P51788 898 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 DGKQP52824 942 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 CTSCP53634 463 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 ABRQ12979 859 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 FXNQ16595 210 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 USP39Q53GS9 565 aaKnown RBP16.27■□□□□ 0.19
SAMM50-201ENST00000350028 TBCELQ5QJ74 424 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 FBXL19Q6PCT2 694 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 TMEM220Q6QAJ8 160 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 NLRP8Q86W28 1048 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 IFNEQ86WN2 208 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 KLHDC8AQ8IYD2 350 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 SLC13A3Q8WWT9 602 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 ARRDC3Q96B67 414 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 PPWD1Q96BP3 646 aaKnown RBP16.27■□□□□ 0.19
SAMM50-201ENST00000350028 MTFMTQ96DP5 389 aaKnown RBP16.27■□□□□ 0.19
SAMM50-201ENST00000350028 CMTM7Q96FZ5 175 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 CCDC138Q96M89 665 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 TMEM74Q96NL1 305 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 ACPTQ9BZG2 426 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 SLC22A14Q9Y267 594 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 ITM2BQ9Y287 266 aa16.27■□□□□ 0.19
SAMM50-201ENST00000350028 UGDHO60701 494 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 TIPRLO75663 272 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 JUPP14923 745 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 MAPK1P28482 360 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 PFN3P60673 137 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 ELAVL3Q14576 367 aaKnown RBP16.26■□□□□ 0.19
SAMM50-201ENST00000350028 LIPJQ5W064 366 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 HMBOX1Q6NT76 420 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 GALNT4Q8N4A0 578 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 OR8J3Q8NGG0 315 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 DNAJB8Q8NHS0 232 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 FGF13Q92913 245 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 PYCR2Q96C36 320 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 PPP1R16AQ96I34 528 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 ZFYVE19Q96K21 471 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 WRAP53Q9BUR4 548 aaKnown RBP16.26■□□□□ 0.19
SAMM50-201ENST00000350028 ZCCHC2Q9C0B9 1178 aaKnown RBP16.26■□□□□ 0.19
SAMM50-201ENST00000350028 SEMA6AQ9H2E6 1030 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 CLMPQ9H6B4 373 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 COQ10BQ9H8M1 238 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 TRPV4Q9HBA0 871 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 ZFP14Q9HCL3 533 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 AP3M1Q9Y2T2 418 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 TMED5Q9Y3A6 229 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 PCDHB3Q9Y5E6 796 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 AP4B1Q9Y6B7 739 aa16.26■□□□□ 0.19
SAMM50-201ENST00000350028 ARHGEF33A8MVX0 844 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 SPINT1O43278 529 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 AKAP10O43572 662 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 AP1G1O43747 822 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 LINGO3P0C6S8 592 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms