RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 EFHD1Q9BUP0 239 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 NANOGQ9H9S0 305 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 KCTD5Q9NXV2 234 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 TMPRSS11EQ9UL52 423 aa13.58□□□□□ -0.24
TRIM4-201ENST00000349062 TNPO3Q9Y5L0 923 aaKnown RBP13.58□□□□□ -0.24
TRIM4-201ENST00000349062 SPTBN5Q9NRC6 3674 aaKnown RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 LINC01553A4QN01 128 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 K7EPI3 171 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 ARPC2O15144 300 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 TULP3O75386 442 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 ABCB1P08183 1280 aaPredicted RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 HSPA1AP0DMV8 641 aaKnown RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 HSPA1BP0DMV9 641 aaKnown RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 ATP1B2P14415 290 aaPredicted RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 TRAF3Q13114 568 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CBX3Q13185 183 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 RAET1GQ6H3X3 334 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM220Q6QAJ8 160 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 RAVER1Q8IY67 606 aaKnown RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CFAP206Q8IYR0 622 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CBR4Q8N4T8 237 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 ZNF382Q96SR6 550 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 ASPDHA6ND91 283 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 TMX2-CTNND1H3BSU7 103 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 H7C0S8 307 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 FXYD1O00168 92 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CPSF4O95639 269 aaKnown RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CDH2P19022 906 aaPredicted RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 POLR2LP62875 67 aaKnown RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 LAPTM5Q13571 262 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 SYTL1Q8IYJ3 562 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CLEC4FQ8N1N0 589 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM159Q96B96 161 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CEP295NLQ96MC4 621 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 OR2AG1Q9H205 316 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 RIMS3Q9UJD0 308 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 PLAGL1Q9UM63 463 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM98Q9Y2Y6 226 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 U3KQV3 271 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 A0A1W2PP18 115 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 PRRT4C9JH25 899 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 PDYNP01213 254 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 IMPDH2P12268 514 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 ZNF23P17027 643 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 IL10P22301 178 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 TACR1P25103 407 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 IRF8Q02556 426 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CHIT1Q13231 466 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 XKR6Q5GH73 641 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 SUSD1Q6UWL2 747 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 OFCC1Q8IZS5 231 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 CPXM2Q8N436 756 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 FAM47BQ8NA70 645 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 OR2T34Q8NGX1 318 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 OR2T3Q8NH03 318 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 RSPRY1Q96DX4 576 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 LRTM1Q9HBL6 345 aa13.57□□□□□ -0.24
TRIM4-201ENST00000349062 EIF3LQ9Y262 564 aaKnown RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
TRIM4-201ENST00000349062 FADS2P1A8MWK0 482 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 CFAP99D6REC4 459 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 GMNNO75496 209 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 PSMA4P25789 261 aaKnown RBP13.56□□□□□ -0.24
TRIM4-201ENST00000349062 RHDQ02161 417 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 MAPKAPK3Q16644 382 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 ZNF554Q86TJ5 538 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 SLCO4A1Q96BD0 722 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 OR52E6Q96RD3 313 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 HAUS8Q9BT25 410 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 WBP1LQ9NX94 342 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM181Q9P2C4 612 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 LEF1Q9UJU2 399 aaPredicted RBP13.56□□□□□ -0.24
TRIM4-201ENST00000349062 RAB26Q9ULW5 256 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 HS3ST2Q9Y278 367 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 DLGAP4Q9Y2H0 992 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 ZFC3H1O60293 1989 aaKnown RBP13.56□□□□□ -0.24
TRIM4-201ENST00000349062 C7orf72A4D263 438 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 SLC22A2O15244 555 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 LATO43561 262 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 C1QCP02747 245 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 ADH5P11766 374 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 PBX2P40425 430 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 IST1P53990 364 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 ESRRGP62508 458 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■□□□□ 8.5
TRIM4-201ENST00000349062 CDKN3Q16667 212 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 C9orf50Q5SZB4 431 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM214Q6NUQ4 689 aaKnown RBP13.56□□□□□ -0.24
TRIM4-201ENST00000349062 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
TRIM4-201ENST00000349062 ARMC7Q9H6L4 198 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 IL36AQ9UHA7 158 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 MYO15AQ9UKN7 3530 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 WDR87Q6ZQQ6 2873 aa13.56□□□□□ -0.24
TRIM4-201ENST00000349062 CASQ2O14958 399 aaPredicted RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 KIAA0355O15063 1070 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 RGS14O43566 566 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 DENRO43583 198 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms