RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PLCZ1Q86YW0 608 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 OFCC1Q8IZS5 231 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 SMG8Q8ND04 991 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 TNFRSF25Q93038 417 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 POMPQ9Y244 141 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CCL22O00626 93 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CILPO75339 1184 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 C4BPAP04003 597 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CXCR2P25025 360 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CD6P30203 668 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 MED22Q15528 200 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 MAPKAPK3Q16644 382 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 PYROXD2Q8N2H3 581 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 C1orf127Q8N9H9 656 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CHPT1Q8WUD6 406 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 RHBDF1Q96CC6 855 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CSPG4P5Q96PW8 444 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 COPS8Q99627 209 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 MRPL57Q9BQC6 102 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 DERAQ9Y315 318 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 MAU2Q9Y6X3 613 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 GRM6O15303 877 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 SNRPB2P08579 225 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 NR2F1P10589 423 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 FBXO48Q5FWF7 155 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 UBXN11Q5T124 520 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 ZCCHC12Q6PEW1 402 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 BEND4Q6ZU67 534 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 UBE2R2Q712K3 238 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CHST9Q7L1S5 443 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CMTR2Q8IYT2 770 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 TERB2Q8NHR7 220 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 HAPLN3Q96S86 360 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 WRAP53Q9BUR4 548 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 PAK6Q9NQU5 681 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 GLTPQ9NZD2 209 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 ATRNO75882 1429 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CARNS1A5YM72 827 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 NRP2O60462 931 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 B4GALT4O60513 344 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 PTPN6P29350 595 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 MOGSQ13724 837 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 LYPLAL1Q5VWZ2 237 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 TRABD2AQ86V40 505 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 IGFN1Q86VF2 1251 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 RALGPS2Q86X27 583 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 C12orf66Q96MD2 445 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 FAIM2Q9BWQ8 316 aa10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 ZFP37Q9Y6Q3 630 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-202ENST00000348513 CACNB4O00305 520 aaPredicted RBP10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 FOXD2O60548 495 aaPredicted RBP10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 KRT33AO76009 404 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 PGLSO95336 258 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 MAOBP27338 520 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 PTSQ03393 145 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 MBTD1Q05BQ5 628 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 PITRM1Q5JRX3 1037 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 OR4K2Q8NGD2 314 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 LILRB1Q8NHL6 650 aaPredicted RBP10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 UBE2E3Q969T4 207 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 BTN2A3PQ96KV6 586 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 AGAP2Q99490 1192 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 GLOD4Q9HC38 313 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 SDHAF2Q9NX18 166 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 DCAF16Q9NXF7 216 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 NPAP1Q9NZP6 1156 aa10.9□□□□□ -0.67
SMARCE1-202ENST00000348513 BCKDKO14874 412 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 AP2A2O94973 939 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 IFNA10P01566 189 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 IFNA4P05014 189 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 EPHX1P07099 455 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 FGRP09769 529 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC2A2P11168 524 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 S100PP25815 95 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 HTR2AP28223 471 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 CCL14Q16627 93 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SPPL2BQ8TCT7 592 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SGK3Q96BR1 496 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 C3orf49Q96BT1 292 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 DCSTAMPQ9H295 470 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 PNPOQ9NVS9 261 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 NDRG2Q9UN36 371 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 OR2AT4A6NND4 320 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 NUPL2O15504 423 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 HIST1H2ABP04908 130 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 INHAP05111 366 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ADRA1BP35368 520 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 FAUP35544 74 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 IFNGR2P38484 337 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 NRG1Q02297 640 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF404Q494X3 552 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 INTS6LQ5JSJ4 861 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 PGAM4Q8N0Y7 254 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC34A3Q8N130 599 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ZSWIM3Q96MP5 696 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms