RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 FURINP09958 794 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 TAC1P20366 129 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 LHCGRP22888 699 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 MPSTP25325 297 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 CRABP2P29373 138 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 SERPINA4P29622 427 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 CSTF2P33240 577 aaKnown RBP eCLIP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 HMGCLP35914 325 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 SLC26A3P40879 764 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 STAT5AP42229 794 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 SLC1A2P43004 574 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 CD151P48509 253 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 PRAMEP78395 509 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 CDK3Q00526 305 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 POU4F1Q01851 419 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 ILF3Q12906 894 aaKnown RBP eCLIP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 ZKSCAN8Q15776 578 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 ZNF470Q6ECI4 717 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 MRNIPQ6NTE8 343 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 WDR74Q6RFH5 385 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 HEATR4Q86WZ0 1026 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 TRIM42Q8IWZ5 723 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 SFRP1Q8N474 314 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 TTC30BQ8N4P2 665 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 MGARPQ8TDB4 240 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 BLOC1S5Q8TDH9 187 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 ZNF473Q8WTR7 871 aaKnown RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 HDAC10Q969S8 669 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 DTD2Q96FN9 168 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 CDKN2AIPNLQ96HQ2 116 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 EFHD1Q9BUP0 239 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 NSRP1Q9H0G5 558 aaKnown RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 GPN2Q9H9Y4 310 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 SNX15Q9NRS6 342 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 INTS10Q9NVR2 710 aaKnown RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 IL1RAPL1Q9NZN1 696 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 SLC17A6Q9P2U8 582 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 VPS9D1Q9Y2B5 631 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 SPO11Q9Y5K1 396 aa9.5□□□□□ -0.89
MRPL55-204ENST00000348259 PCYT1BQ9Y5K3 369 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-204ENST00000348259 A0A0J9YYE9 177 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 A6NCN8 305 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 CD3EAPO15446 510 aaKnown RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 STK17BO94768 372 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 EML2O95834 649 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 TRBC1P01850 177 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 PRKAR1AP10644 381 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 CD9P21926 228 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 NFKBIAP25963 317 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 FOXN2P32314 431 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 GNPDA1P46926 289 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 SERPINB4P48594 390 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 MLLT10P55197 1068 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 DPTQ07507 201 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 DMTNQ08495 405 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 CTBP1Q13363 440 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 TYSND1Q2T9J0 566 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 DEFB109BQ30KR1 87 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 CCDC153Q494R4 210 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 GKAP1Q5VSY0 366 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 SLC30A9Q6PML9 568 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 AFTPHQ6ULP2 937 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 CDHR3Q6ZTQ4 885 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 GLT6D1Q7Z4J2 308 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 HSD11B1LQ7Z5J1 315 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 TECPR1Q7Z6L1 1165 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 SDCCAG8Q86SQ7 713 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 DENND6AQ8IWF6 608 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 LRRC34Q8IZ02 419 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 LPCAT1Q8NF37 534 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 OR6P1Q8NGX9 317 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 OR4L1Q8NH43 312 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 SLC37A2Q8TED4 501 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 ZNF75CPQ92670 426 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 NUS1Q96E22 293 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 DNAJC1Q96KC8 554 aaKnown RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 FAM111AQ96PZ2 611 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 MCCC1Q96RQ3 725 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 CTRCQ99895 268 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 ZPBPQ9BS86 351 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 PHPT1Q9NRX4 125 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 KCTD5Q9NXV2 234 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 IL17CQ9P0M4 197 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 SLC17A7Q9P2U7 560 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 PHTF1Q9UMS5 762 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 KCTD3Q9Y597 815 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 MRPS18BQ9Y676 258 aaKnown RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 ARL5AQ9Y689 179 aa9.49□□□□□ -0.89
MRPL55-204ENST00000348259 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-204ENST00000348259 A0A087X1B8 175 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 A0A096LPK6 155 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 CCDC162PA2VCL2 907 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 TCP11X1B4DZS4 312 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 GOLGA8TH3BQL2 631 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 PSMD11O00231 422 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 PFDN6O15212 129 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 ZW10O43264 779 aa9.48□□□□□ -0.89
MRPL55-204ENST00000348259 PLIN3O60664 434 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms