RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CXorf40BQ96DE9 158 aa18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 TMEM237Q96Q45 408 aa18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 EGFL8Q99944 293 aa18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 TRIM54Q9BYV2 358 aa18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 MVB12BQ9H7P6 319 aa18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 STOX2Q9P2F5 926 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 CPNE7Q9UBL6 633 aa18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 MID2Q9UJV3 735 aa18.46■□□□□ 0.55
CHMP4A-201ENST00000347519 KIR2DS5A0A0G2JLQ3 304 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 A0A0G2JNG1 304 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 LNP1A1A4G5 178 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 PROB1E7EW31 1015 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 KIR2DS3K7RE56 304 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 TRIM38O00635 465 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 DFNA5O60443 496 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 CER1O95813 267 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC16A8O95907 504 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 HIST1H2AGP0C0S8 130 aaPredicted RBP18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 HIST1H2ADP20671 130 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 CCT8P50990 548 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 AP1S2P56377 157 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 NFKB2Q00653 900 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 GUCY1A3Q02108 690 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 SPEM2Q0P670 501 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 FASTKQ14296 549 aaKnown RBP18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 KRT33BQ14525 404 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 KIR2DS5Q14953 304 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 SETDB1Q15047 1291 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 ATG14Q6ZNE5 492 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 NUDCD3Q8IVD9 361 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 ARL14Q8N4G2 192 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 KYQ8NBH2 561 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 PPFIBP2Q8ND30 876 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 OR52E1Q8NGJ3 308 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 ZNF480Q8WV37 535 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 RAD51AP1Q96B01 352 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 FBXL8Q96CD0 374 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 HIST1H2AHQ96KK5 128 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 CCDC138Q96M89 665 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 HIST1H2AJQ99878 128 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 H2AFJQ9BTM1 129 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 GATA5Q9BWX5 397 aaPredicted RBP18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 ATG10Q9H0Y0 220 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 XKR8Q9H6D3 395 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 PARD6AQ9NPB6 346 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 RXFP3Q9NSD7 469 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 ICKQ9UPZ9 632 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 HEBP2Q9Y5Z4 205 aa18.45■□□□□ 0.54
CHMP4A-201ENST00000347519 OR5K4A6NMS3 321 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 BIRC5O15392 142 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 IPO13O94829 963 aaKnown RBP18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 S100BP04271 92 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 ANXA5P08758 320 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 ZNF806P0C7X5 589 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 GDF5P43026 501 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 CCR10P46092 362 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 HSPA7P48741 367 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 ALDH18A1P54886 795 aaKnown RBP18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 CHI3L2Q15782 390 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 UNC50Q53HI1 259 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 C6orf132Q5T0Z8 1188 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 LIPMQ5VYY2 423 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 SULT1C3Q6IMI6 304 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 TAX1BP1Q86VP1 789 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 ZNF761Q86XN6 746 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 LRRC56Q8IYG6 542 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 C2orf73Q8N5S3 287 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 GPR156Q8NFN8 814 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 OR6Y1Q8NGX8 325 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 MAPK15Q8TD08 544 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC40A1Q9NP59 571 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 COLEC10Q9Y6Z7 277 aa18.44■□□□□ 0.54
CHMP4A-201ENST00000347519 PPM1DO15297 605 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 TRIM13O60858 407 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 VIPP01282 170 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 RPN2P04844 631 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 ERGP11308 486 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC2A4P14672 509 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 EEF1DP29692 281 aaKnown RBP18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 ARRB2P32121 409 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 MDH1P40925 334 aaKnown RBP18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 NAGLUP54802 743 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 DNAJB13P59910 316 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 GPR18Q14330 331 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 CDKL4Q5MAI5 379 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 ZNF678Q5SXM1 525 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 TTC23LQ6PF05 361 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 AGTRAPQ6RW13 159 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 TRIM48Q8IWZ4 208 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC35F3Q8IY50 421 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 MAGEC3Q8TD91 643 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 CKAP2Q8WWK9 683 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 PYCR2Q96C36 320 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 NSUN5Q96P11 429 aaKnown RBP18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 PITPNM3Q9BZ71 974 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 KIR3DX1Q9H7L2 352 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 ZNF395Q9H8N7 513 aaPredicted RBP18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 POT1Q9NUX5 634 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 WWOXQ9NZC7 414 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms