RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 USP17L11C9JVI0 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 USP17L18D6R9N7 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 USP17L22D6RA61 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 USP17L17D6RBQ6 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 USP17L19D6RCP7 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 USP17L20D6RJB6 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 J3QRK9 145 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 IMPA2O14732 288 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 FXR2P51116 673 aaKnown RBP eCLIP6.06□□□□□ -1.444e-8■■■■■ 35.7
VCAN-203ENST00000343200 GABARAPL2P60520 117 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PRKCZQ05513 592 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 USP17L24Q0WX57 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ARHGAP11BQ3KRB8 267 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF311Q5JNZ3 666 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 C10orf120Q5SQS8 335 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ADGRF4Q8IZF3 695 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NKAPQ8N5F7 415 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 FBXL8Q96CD0 374 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SCRN2Q96FV2 425 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PTPRHQ9HD43 1115 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 AQP12BA6NM10 295 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PP2D1A8MPX8 630 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 EDF1O60869 148 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 TFP02787 698 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 OR56A5P0C7T3 313 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 LINC00032P0C843 101 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TAS2R43P59537 309 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TAS2R50P59544 299 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 RANP62826 216 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 PEA15Q15121 130 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NFE2Q16621 373 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 EIPR1Q53HC9 387 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CDKAL1Q5VV42 579 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NGLY1Q96IV0 654 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF597Q96LX8 424 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SPATA33Q96N06 139 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 FN3KQ9H479 309 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 C8orf33Q9H7E9 229 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 PAK1IP1Q9NWT1 392 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 CYP8B1Q9UNU6 501 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CLTCQ00610 1675 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 C17orf113A0A1B0GUU1 675 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 MTA2O94776 668 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TOXO94900 526 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 INMTO95050 263 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 C7P10643 843 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TPT1P13693 172 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 IL13P35225 146 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PLXNA3P51805 1871 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ACOX1Q15067 660 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 GCNT6Q5T4J0 391 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 NUP54Q7Z3B4 507 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 WDR53Q7Z5U6 358 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZFP82Q8N141 532 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF808Q8N4W9 903 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 SSU72Q9NP77 194 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 IFT52Q9Y366 437 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TCRBV9S1A1TA0A576 114 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CAPN14A8MX76 684 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 A8MXE2 369 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PSMD9O00233 223 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TP73O15350 636 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 YKT6O15498 198 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 RDH16O75452 317 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 RFPL3O75679 317 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TRBC1P01850 177 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 DCNP07585 359 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 CHRM1P11229 460 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 CCND3P30281 292 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 SLC11A2P49281 568 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ORC1Q13415 861 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 LARS2Q15031 903 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 CYP2A13Q16696 494 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 COL13A1Q5TAT6 717 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 TANGO2Q6ICL3 276 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ADGRG6Q86SQ4 1221 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 RASGRP3Q8IV61 690 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 GTPBP8Q8N3Z3 284 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 ATP6V0D2Q8N8Y2 350 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 IP6K1Q92551 441 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 FRZBQ92765 325 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PPM1MQ96MI6 270 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PRICKLE1Q96MT3 831 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 MCCC1Q96RQ3 725 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 BCL7BQ9BQE9 202 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NUSAP1Q9BXS6 441 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 OSGEPQ9NPF4 335 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CD300AQ9UGN4 299 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 MRTO4Q9UKD2 239 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF780BQ9Y6R6 833 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NALCNQ8IZF0 1738 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 DLEC1Q9Y238 1755 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CDC7O00311 574 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PAPSS1O43252 624 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 HCN1O60741 890 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 MGAT1P26572 445 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CYP2C18P33260 490 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 XKP51811 444 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF132P52740 706 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms