RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 DOCK9Q9BZ29 2069 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 IGLON5A6NGN9 336 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 FTH1P02794 183 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 CATP04040 527 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PRNPP04156 253 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 ACADSP16219 412 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF23P17027 643 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 CD72P21854 359 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PAX7P23759 505 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 CNTN1Q12860 1018 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 LRRC23Q53EV4 343 aaPredicted RBP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PRSS36Q5K4E3 855 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 KRT80Q6KB66 452 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 SYT12Q8IV01 421 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 FAM20CQ8IXL6 584 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PLA2G15Q8NCC3 412 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 VN1R2Q8NFZ6 395 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 FRS2Q8WU20 508 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 DNAJC11Q9NVH1 559 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 CLDND1Q9NY35 253 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 CNOT6Q9ULM6 557 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 LRRC42Q9Y546 428 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 U3KQV3 271 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 ARPC2O15144 300 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 FGF19O95750 216 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 FGF4P08620 206 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 HNRNPA1P09651 372 aaKnown RBP eCLIP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 MYCLP1P12525 358 aaPredicted RBP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 SLC6A2P23975 617 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PSMA4P25789 261 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 OR4D2P58180 307 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 BLOC1S3Q6QNY0 202 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 ZBTB49Q6ZSB9 765 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PROKR1Q8TCW9 393 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 FAM162AQ96A26 154 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 COQ10BQ9H8M1 238 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 SGK2Q9HBY8 427 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 SDR39U1Q9NRG7 319 aaPredicted RBP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PTBP2Q9UKA9 531 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PCDHGB4Q9UN71 923 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 PCDHGB5Q9Y5G0 923 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 IRAK3Q9Y616 596 aa9.92□□□□□ -0.82
RBFOX1-202ENST00000340209 DHRS12A0PJE2 317 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 BCAS2O75934 225 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 AOAHP28039 575 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 POLE2P56282 527 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 LAPTM5Q13571 262 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF621Q6ZSS3 439 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 PLD3Q8IV08 490 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 OR14C36Q8NHC7 312 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ASB9Q96DX5 294 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 APIPQ96GX9 242 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ASB16Q96NS5 453 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 SAMD11Q96NU1 681 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 PLA2G2FQ9BZM2 168 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 SLC32A1Q9H598 525 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 HPS4Q9NQG7 708 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 AP4B1Q9Y6B7 739 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 SPEGQ15772 3267 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 CARNS1A5YM72 827 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ENO4A6NNW6 628 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 PDZK1P1A8MUH7 402 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 KAT7O95251 611 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF682O95780 498 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 IL10P22301 178 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 GCKP35557 465 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 GALNT1Q10472 559 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ADGRE1Q14246 886 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 NANOGP8Q6NSW7 305 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 AAGABQ6PD74 315 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 AGTRAPQ6RW13 159 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 PARM1Q6UWI2 310 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 PGBD3Q8N328 593 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF513Q8N8E2 541 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ECHDC3Q96DC8 303 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 PPP3R2Q96LZ3 170 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ACPTQ9BZG2 426 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 NANOGQ9H9S0 305 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 DPP7Q9UHL4 492 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 A0A1W2PP18 115 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 POP7O75817 140 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ADRB3P13945 408 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ETS2P15036 469 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 TPD52P55327 224 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 INPP5AQ14642 412 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 OR4F3Q6IEY1 312 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 SPATA19Q7Z5L4 167 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 SLC44A2Q8IWA5 706 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 HDDC3Q8N4P3 179 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 TERB1Q8NA31 727 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 BTN2A2Q8WVV5 523 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 ZSCAN5AQ9BUG6 496 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 NUSAP1Q9BXS6 441 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 CPEB1Q9BZB8 566 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 CEP44Q9C0F1 390 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 CAAP1Q9H8G2 361 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 IMP3Q9NV31 184 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 KCNK6Q9Y257 313 aa9.91□□□□□ -0.82
RBFOX1-202ENST00000340209 LSM1O15116 133 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms