RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 DNAJC11Q9NVH1 559 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 NDE1Q9NXR1 346 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 C2CD4DB7Z1M9 353 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 CATP04040 527 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 G6PDP11413 515 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC2A4P14672 509 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 GNAZP19086 355 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 CDK3Q00526 305 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 NAE1Q13564 534 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 INPP5AQ14642 412 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 IL23RQ5VWK5 629 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 AGTRAPQ6RW13 159 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 FAM83HQ6ZRV2 1179 aaPredicted RBP21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 OR14C36Q8NHC7 312 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC26A7Q8TE54 656 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 FBXL8Q96CD0 374 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 COX14Q96I36 57 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 FOPNLQ96NB1 174 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 SERPINI1Q99574 410 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 STOX2Q9P2F5 926 aaPredicted RBP21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 MAP10Q9P2G4 905 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 LIMD1Q9UGP4 676 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 POLR3HQ9Y535 204 aaPredicted RBP21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 NPC1O15118 1278 aa21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 AP1G1O43747 822 aa21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC22A3O75751 556 aa21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 ZFP36L2P47974 494 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 RPL38P63173 70 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 BLOC1S3Q6QNY0 202 aa21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 C11orf96Q7Z7L8 435 aa21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 RGL4Q8IZJ4 473 aa21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 BRINP2Q9C0B6 783 aa21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 NOP53Q9NZM5 478 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-203ENST00000339162 TRIOO75962 3097 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 A0A1W2PQF6 199 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 LIN7AO14910 233 aaPredicted RBP21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 ANGPT2O15123 496 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 PDYNP01213 254 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 HOXB2P14652 356 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 IL12AP29459 219 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 HALP42357 657 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 PTDSS1P48651 473 aaKnown RBP21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 STARD3Q14849 445 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 SDE2Q6IQ49 451 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 ADAMTSL4Q6UY14 1074 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC52A3Q9NQ40 469 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC23A2Q9UGH3 650 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 CD207Q9UJ71 328 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 NDUFAF1Q9Y375 327 aa21.83■■□□□ 1.08
PDLIM2-203ENST00000339162 GRXCR2A6NFK2 248 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 CLGNO14967 610 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 VEGFDO43915 354 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 IMPA1P29218 277 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 MS4A2Q01362 244 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 IMPG1Q17R60 797 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 THOC6Q86W42 341 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 RNF175Q8N4F7 328 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 PROKR1Q8TCW9 393 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 SPDL1Q96EA4 605 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 CCDC138Q96M89 665 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 GABRG3Q99928 467 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 RGS14O43566 566 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 C1orf105O95561 183 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 MAT2AP31153 395 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 YBX1P67809 324 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 EMX2Q04743 252 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 CHIT1Q13231 466 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 OR2L2Q8NH16 312 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 USP7Q93009 1102 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 ZNF514Q96K75 400 aaPredicted RBP21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 KCNK12Q9HB15 430 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 CROTQ9UKG9 612 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 GPR34Q9UPC5 381 aa21.82■■□□□ 1.08
PDLIM2-203ENST00000339162 DNTTP04053 509 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 KCNK10P57789 538 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 TSTA3Q13630 321 aaPredicted RBP21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 IRF4Q15306 451 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 TTC23LQ6PF05 361 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 SELENOMQ8WWX9 145 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 OR4K3Q96R72 315 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 MYOCQ99972 504 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 ACPTQ9BZG2 426 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 TRIM8Q9BZR9 551 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 ACTL8Q9H568 366 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 ELOVL6Q9H5J4 265 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 STX18Q9P2W9 335 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 PSMD13Q9UNM6 376 aa21.81■■□□□ 1.08
PDLIM2-203ENST00000339162 KCNE1BA0A087WTH5 132 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 SEC22BO75396 215 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 RSL1D1O76021 490 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 KRT6AP02538 564 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 KRT6BP04259 564 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 ME2P23368 584 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 KRT6CP48668 564 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 CAPRIN1Q14444 709 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 PTGR1Q14914 329 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 PDCD4Q53EL6 469 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 CYP20A1Q6UW02 462 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 TRIM46Q7Z4K8 759 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 FAM124AQ86V42 546 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms