RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 PDE10AQ9Y233 779 aa22.83■■□□□ 1.25
NDEL1-201ENST00000334527 BNIP3LO60238 219 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 CREG1O75629 220 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 CCR7P32248 378 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 NRIP1P48552 1158 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 TPD52P55327 224 aaPredicted RBP22.83■■□□□ 1.24
NDEL1-201ENST00000334527 PPP2R2BQ00005 443 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 RAB33AQ14088 237 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 SLC44A4Q53GD3 710 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 LRRC66Q68CR7 880 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 FAM117BQ6P1L5 589 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 SPESP1Q6UW49 350 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 OR13F1Q8NGS4 319 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 SELENOMQ8WWX9 145 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 COPS8Q99627 209 aa22.83■■□□□ 1.24
NDEL1-201ENST00000334527 DCAF13Q9NV06 445 aaKnown RBP22.83■■□□□ 1.24
NDEL1-201ENST00000334527 FAM220BPB1ANY3 271 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 NOL3O60936 208 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 RETP07949 1114 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 IL7RP16871 459 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 CYP4F8P98187 520 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 B4GALNT1Q00973 533 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 PPP1R8Q12972 351 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 ATP13A5Q4VNC0 1218 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 RBM48Q5RL73 367 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 ANKRD34AQ69YU3 496 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 KLHL35Q6PF15 583 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 UBE2R2Q712K3 238 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 BBS7Q8IWZ6 715 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 ZNF555Q8NEP9 628 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 FAM120BQ96EK7 910 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 CPPED1Q9BRF8 314 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 AMBRA1Q9C0C7 1298 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 KIAA1522Q9P206 1035 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 FOXD2O60548 495 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 PFDN1O60925 122 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 OBSL1O75147 1896 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 ERN1O75460 977 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 GSNP06396 782 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 MATN1P21941 496 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 CRHBPP24387 322 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 S100A3P33764 101 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 STK19P49842 368 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 PLEKHG6Q3KR16 790 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 TPRG1Q6ZUI0 275 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 FKBP9P1Q75LS8 142 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 R3HCC1LQ7Z5L2 792 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 C10orf111Q8N326 155 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 SKA2Q8WVK7 121 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 HSPBAP1Q96EW2 488 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 TMEM169Q96HH4 297 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 CNDP2Q96KP4 475 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 LYSMD1Q96S90 227 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 RBM4BQ9BQ04 359 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 RBM4Q9BWF3 364 aaKnown RBP22.82■■□□□ 1.24
NDEL1-201ENST00000334527 KCNH6Q9H252 994 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 CFAP97Q9P2B7 532 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 PCDHGA8Q9Y5G5 932 aa22.82■■□□□ 1.24
NDEL1-201ENST00000334527 ARHGEF15O94989 841 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 SERPINA1P01009 418 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 CKMP06732 381 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 PIGAP37287 484 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 CTSOP43234 321 aaPredicted RBP22.81■■□□□ 1.24
NDEL1-201ENST00000334527 NEK2P51955 445 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 CLDN8P56748 225 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 EPS8Q12929 822 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 TMED1Q13445 227 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 RFLNAQ6ZTI6 216 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 ANKRD46Q86W74 232 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 CROCCP3Q8IVE0 287 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 PJA1Q8NG27 643 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 DNAJB8Q8NHS0 232 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 NETO1Q8TDF5 533 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 HHIPL1Q96JK4 782 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 TSSK3Q96PN8 268 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 ELOVL6Q9H5J4 265 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 SERHLQ9NQF3 203 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 MRPL17Q9NRX2 175 aaKnown RBP22.81■■□□□ 1.24
NDEL1-201ENST00000334527 USE1Q9NZ43 259 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 TMEM9Q9P0T7 183 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 INTS6Q9UL03 887 aaKnown RBP22.81■■□□□ 1.24
NDEL1-201ENST00000334527 A0A096LPI6 279 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 CXCL10P02778 98 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 JUNBP17275 347 aaPredicted RBP22.81■■□□□ 1.24
NDEL1-201ENST00000334527 MAPK10P53779 464 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 PTPN5P54829 565 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 GRSF1Q12849 480 aaKnown RBP eCLIP22.81■■□□□ 1.24
NDEL1-201ENST00000334527 C16orf72Q14CZ0 275 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 LRIF1Q5T3J3 769 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 CALHM3Q86XJ0 350 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 ADHFE1Q8IWW8 467 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 PLPP6Q8IY26 295 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 TCEAL8Q8IYN2 117 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 TMEM132CQ8N3T6 1108 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 SCRN2Q96FV2 425 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 INPP5KQ9BT40 448 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 SNX6Q9UNH7 406 aa22.81■■□□□ 1.24
NDEL1-201ENST00000334527 ABCB7O75027 752 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 HSPA14Q0VDF9 509 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 NOGQ13253 232 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms