RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ACPTQ9BZG2 426 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 RPF2Q9H7B2 306 aaKnown RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 ZNF696Q9H7X3 374 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 WBP1LQ9NX94 342 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 IL36AQ9UHA7 158 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 SLC8A2Q9UPR5 921 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 NEUROG3Q9Y4Z2 214 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 KANSL1LA0AUZ9 987 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 SLC16A5O15375 505 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 ARHGEF15O94989 841 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 PDYNP01213 254 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 UMPSP11172 480 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 TCF3P15923 654 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 SYN1P17600 705 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 CYP2A7P20853 494 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 NFKBIAP25963 317 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 TXNL4AP83876 142 aaKnown RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 FPGSQ05932 587 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 GGTA1PQ4G0N0 100 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 TMEM240Q5SV17 173 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 HENMT1Q5T8I9 393 aaKnown RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 INTS11Q5TA45 600 aaKnown RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 SUSD1Q6UWL2 747 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 SPRED2Q7Z698 418 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 EPHX4Q8IUS5 362 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 TRAM1L1Q8N609 369 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 BEND7Q8N7W2 519 aaPredicted RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 PYCR2Q96C36 320 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 CENPNQ96H22 339 aaPredicted RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 RIOK2Q9BVS4 552 aaKnown RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 ANAPC2Q9UJX6 822 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 PCDHB3Q9Y5E6 796 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 MYO7AQ13402 2215 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 KRT87PA6NCN2 255 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 FADS2P1A8MWK0 482 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 SLC9A3R1O14745 358 aaPredicted RBP16.97■□□□□ 0.31
DDX28-201ENST00000332395 AP2A2O94973 939 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 PGM3O95394 542 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 FCGR1AP12314 374 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 CCT8P50990 548 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 CAMK1Q14012 370 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 POM121L1PQ3SYA9 428 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 SLC44A4Q53GD3 710 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 NEK5Q6P3R8 708 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 IYDQ6PHW0 289 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 CARM1Q86X55 608 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 CBR4Q8N4T8 237 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 KRTCAP2Q8N6L1 136 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 PACRGLQ8N7B6 248 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 DDHD1Q8NEL9 900 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 OR8J3Q8NGG0 315 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 SELENOMQ8WWX9 145 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 ZSCAN5AQ9BUG6 496 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 CLMPQ9H6B4 373 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 DUS2Q9NX74 493 aaKnown RBP16.97■□□□□ 0.31
DDX28-201ENST00000332395 VAPAQ9P0L0 249 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 CHD7Q9P2D1 2997 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 NFKBIL1Q9UBC1 381 aaPredicted RBP16.97■□□□□ 0.31
DDX28-201ENST00000332395 MAGEL2Q9UJ55 1249 aa16.97■□□□□ 0.31
DDX28-201ENST00000332395 KCNE1BA0A087WTH5 132 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 ARHGAP10A1A4S6 786 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 OR2AG2A6NM03 316 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 OR6B1O95007 311 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 PGRP06401 933 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 XPAP23025 273 aaPredicted RBP16.96■□□□□ 0.31
DDX28-201ENST00000332395 AP1S2P56377 157 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 DHCR24Q15392 516 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 USP39Q53GS9 565 aaKnown RBP16.96■□□□□ 0.31
DDX28-201ENST00000332395 SPANXN4Q5MJ08 99 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 ZNF648Q5T619 568 aaPredicted RBP16.96■□□□□ 0.31
DDX28-201ENST00000332395 NEK10Q6ZWH5 1172 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 PAPD5Q8NDF8 572 aaKnown RBP16.96■□□□□ 0.31
DDX28-201ENST00000332395 MCOLN3Q8TDD5 553 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 ASZ1Q8WWH4 475 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 GTF2H4Q92759 462 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 BIRC7Q96CA5 298 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 DGCR14Q96DF8 476 aaKnown RBP16.96■□□□□ 0.31
DDX28-201ENST00000332395 MPP4Q96JB8 637 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 ELOVL6Q9H5J4 265 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 RAD18Q9NS91 495 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 PTTG2Q9NZH5 202 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 FBXO10Q9UK96 956 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 SNX6Q9UNH7 406 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 DFNA5O60443 496 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 FTH1P02794 183 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 IL6P05231 212 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 BCKDHAP12694 445 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 DGKGP49619 791 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 MAPKAPK3Q16644 382 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 NHSL2Q5HYW2 709 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 GLYATQ6IB77 296 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 DPPA4Q7L190 304 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 ZNF366Q8N895 744 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 CLHC1Q8NHS4 586 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 NMD3Q96D46 503 aaKnown RBP16.96■□□□□ 0.31
DDX28-201ENST00000332395 LRRC3BQ96PB8 259 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 PRPF18Q99633 342 aaKnown RBP16.96■□□□□ 0.31
DDX28-201ENST00000332395 DKK3Q9UBP4 350 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms