RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NDNFQ8TB73 568 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 NRBF2Q96F24 287 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 CHID1Q9BWS9 393 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 BACE2Q9Y5Z0 518 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 NUP214P35658 2090 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 PRMT5O14744 637 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 PCNAP12004 261 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 GALNT1Q10472 559 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 GAREM2Q75VX8 874 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 PEX13Q92968 403 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 TMEM125Q96AQ2 219 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 RNF145Q96MT1 663 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 EPS8L2Q9H6S3 715 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 EXD2Q9NVH0 621 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 HACD3Q9P035 362 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 SLCO3A1Q9UIG8 710 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 CRLS1Q9UJA2 301 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ENPP5Q9UJA9 477 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 PIKFYVEQ9Y2I7 2098 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 UPK1AO00322 258 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 MTX2O75431 263 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 GPIP06744 558 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 HNF1BP35680 557 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 DGKQP52824 942 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 IST1P53990 364 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 BNIP2Q12982 314 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 NR6A1Q15406 480 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 CTU2Q2VPK5 515 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 CATSPEREQ5SY80 951 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ATAD3BQ5T9A4 648 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 LAIR2Q6ISS4 152 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 CHST9Q7L1S5 443 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 PHYKPLQ8IUZ5 450 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 HJURPQ8NCD3 748 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 BIRC7Q96CA5 298 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ANAPC2Q9UJX6 822 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ANKRD34BA5PLL1 514 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 CSF2RAP15509 400 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 KCNK10P57789 538 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ASIC4Q96FT7 647 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 HHIPL1Q96JK4 782 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 YME1L1Q96TA2 773 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ZFP14Q9HCL3 533 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 IL26Q9NPH9 171 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 MRPL17Q9NRX2 175 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 INTS7Q9NVH2 962 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 COMMD8Q9NX08 183 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 BAG5Q9UL15 447 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 IFT52Q9Y366 437 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 ANGPTL3Q9Y5C1 460 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 PCDHB3Q9Y5E6 796 aa15.22■□□□□ 0.03
SHROOM1-201ENST00000319854 PTGES3LE9PB15 166 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 H0YAE9 185 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ARSFP54793 590 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 LIPEQ05469 1076 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 CHRNA6Q15825 494 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ADPRMQ3LIE5 342 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 SMUG1Q53HV7 270 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ZSWIM9Q86XI8 627 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 CLHC1Q8NHS4 586 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 HTRA1Q92743 480 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 PPM1MQ96MI6 270 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 WDR12Q9GZL7 423 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ALG2Q9H553 416 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 SLC52A3Q9NQ40 469 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 FARSBQ9NSD9 589 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ABCB8Q9NUT2 735 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 PAK1IP1Q9NWT1 392 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 HCFC1R1Q9NWW0 138 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 CEP290O15078 2479 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 CHD5Q8TDI0 1954 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 E2F3O00716 465 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 FGF4P08620 206 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 RPS17P08708 135 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ALOX5P09917 674 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 HMGCS1Q01581 520 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 LMAN2Q12907 356 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 SKIV2LQ15477 1246 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 DGKKQ5KSL6 1271 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 THAP5Q7Z6K1 395 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 HS3ST5Q8IZT8 346 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ZCCHC7Q8N3Z6 543 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 HOXD1Q9GZZ0 328 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 TP63Q9H3D4 680 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 SMURF2Q9HAU4 748 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 CCL26Q9Y258 94 aa15.21■□□□□ 0.03
SHROOM1-201ENST00000319854 ASPDHA6ND91 283 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 ZBBXA8MT70 800 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 PGLSO95336 258 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 HOXB8P17481 243 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 HRH2P25021 359 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 PIGAP37287 484 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 PTGER3P43115 390 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 CLCN7P51798 805 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 HNRNPFP52597 415 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 TBC1D21Q8IYX1 336 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 PAPD5Q8NDF8 572 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms