RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 MTX2O75431 263 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 ADRA1AP35348 466 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 KPNA2P52292 529 aaKnown RBP12.75□□□□□ -0.37
SYCN-201ENST00000318438 CSNK1G2P78368 415 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 JMJD1CQ15652 2540 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 WASH2PQ6VEQ5 465 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 RANBP10Q6VN20 620 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 VPS13CQ709C8 3753 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 LRRTM4Q86VH4 590 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 KLHDC8BQ8IXV7 354 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 OR1N1Q8NGS0 311 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 SLC35B2Q8TB61 432 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 VPS35Q96QK1 796 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 DPH2Q9BQC3 489 aaPredicted RBP12.75□□□□□ -0.37
SYCN-201ENST00000318438 TIMM29Q9BSF4 260 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 FICDQ9BVA6 458 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.75□□□□□ -0.37
SYCN-201ENST00000318438 IL17CQ9P0M4 197 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 R3HDM2Q9Y2K5 976 aaKnown RBP12.75□□□□□ -0.37
SYCN-201ENST00000318438 PKP3Q9Y446 797 aa12.75□□□□□ -0.37
SYCN-201ENST00000318438 FLNAP21333 2647 aaKnown RBP12.75□□□□□ -0.37
SYCN-201ENST00000318438 TCRBV7S2A1N4TA0A589 114 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 SLC9B1P1A6NJY1 282 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 ZNF749O43361 778 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 VEGFDO43915 354 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 CNOT3O75175 753 aaKnown RBP12.74□□□□□ -0.37
SYCN-201ENST00000318438 CDK14O94921 469 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 CLDN14O95500 239 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 AGTP01019 485 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 UMODP07911 640 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 CBSLP0DN79 551 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 AGXTP21549 392 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 CBSP35520 551 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 SPAM1P38567 509 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 PPP2R2AP63151 447 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 SLC9A5Q14940 896 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 C1orf189Q5VU69 101 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 PRAMEF13Q5VWM6 474 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 MEX3BQ6ZN04 569 aaKnown RBP12.74□□□□□ -0.37
SYCN-201ENST00000318438 LINC00696Q6ZRV3 163 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 ARHGEF18Q6ZSZ5 1173 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 TAOK1Q7L7X3 1001 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 OR2Y1Q8NGV0 311 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 NRGNQ92686 78 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 TRIM56Q9BRZ2 755 aaKnown RBP12.74□□□□□ -0.37
SYCN-201ENST00000318438 FRMD8P1Q9BZ68 369 aaPredicted RBP12.74□□□□□ -0.37
SYCN-201ENST00000318438 EPS8L2Q9H6S3 715 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 GRPEL1Q9HAV7 217 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 BPIFA1Q9NP55 256 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 SLC6A20Q9NP91 592 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 LZTFL1Q9NQ48 299 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 GPN3Q9UHW5 284 aaPredicted RBP12.74□□□□□ -0.37
SYCN-201ENST00000318438 FBXL4Q9UKA2 621 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 PSMD13Q9UNM6 376 aa12.74□□□□□ -0.37
SYCN-201ENST00000318438 NSD1Q96L73 2696 aaPredicted RBP12.74□□□□□ -0.37
SYCN-201ENST00000318438 STAB1Q9NY15 2570 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 OR6C74A6NCV1 312 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 AGPSO00116 658 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 FANCGO15287 622 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 AGAP20933 346 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 HALP42357 657 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 PREPP48147 710 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 SMSP52788 366 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 GDF10P55107 478 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 LTBQ06643 244 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 RPS6KA1Q15418 735 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 TAF1AQ15573 450 aaPredicted RBP12.73□□□□□ -0.37
SYCN-201ENST00000318438 RPE65Q16518 533 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 PARP6Q2NL67 630 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 P3H1Q32P28 736 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 ATP13A5Q4VNC0 1218 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 KHDC1Q4VXA5 237 aaKnown RBP12.73□□□□□ -0.37
SYCN-201ENST00000318438 FAAH2Q6GMR7 532 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 RPUSD3Q6P087 351 aaKnown RBP12.73□□□□□ -0.37
SYCN-201ENST00000318438 Q71RC1 249 aaPredicted RBP12.73□□□□□ -0.37
SYCN-201ENST00000318438 OOSP2Q86WS3 158 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 SLC13A5Q86YT5 568 aaPredicted RBP12.73□□□□□ -0.37
SYCN-201ENST00000318438 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 TMEM121Q9BTD3 319 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 ARNT2Q9HBZ2 717 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 IL26Q9NPH9 171 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
SYCN-201ENST00000318438 TMPRSS11EQ9UL52 423 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 CDYLQ9Y232 598 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
SYCN-201ENST00000318438 SEC16AO15027 2179 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 GLYATL1P3A0A0U1RQE8 302 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 C2orf81A6NN90 581 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 E7EQ34 232 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 STX7O15400 261 aaKnown RBP12.72□□□□□ -0.37
SYCN-201ENST00000318438 LIASO43766 372 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 MST1P26927 711 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 DNAJA1P31689 397 aaKnown RBP12.72□□□□□ -0.37
SYCN-201ENST00000318438 LMAN1P49257 510 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 IST1P53990 364 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 FOXD4Q12950 439 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms