RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 GALNT18Q6P9A2 607 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 FBXL19Q6PCT2 694 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 CALHM3Q86XJ0 350 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 HPS6Q86YV9 775 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TMEM102Q8N9M5 508 aaPredicted RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 ATL1Q8WXF7 558 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 GATA6Q92908 595 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SLCO4A1Q96BD0 722 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 FAM161BQ96MY7 647 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SARGQ9BW04 601 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 ZCCHC2Q9C0B9 1178 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 PITHD1Q9GZP4 211 aaPredicted RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 PREBQ9HCU5 417 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SPAG4Q9NPE6 437 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 C6orf203Q9P0P8 240 aaPredicted RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 CD84Q9UIB8 345 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 LOC730098B7Z3J9 87 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 PDLIM1O00151 329 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 EPB42P16452 691 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TSPAN8P19075 237 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 GALK1P51570 392 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 EEFSECP57772 596 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 METRNLQ641Q3 311 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 ATG9BQ674R7 924 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 FRA10AC1Q70Z53 315 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 PDZD3Q86UT5 571 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 AGR3Q8TD06 166 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SETD7Q8WTS6 366 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 NPAS2Q99743 824 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 MRPL1Q9BYD6 325 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 ACPTQ9BZG2 426 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 STOML1Q9UBI4 398 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 BAIAP2L1Q9UHR4 511 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 FNDC3AQ9Y2H6 1198 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 PRORSD1PA6NEY8 169 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 E7ENX8 843 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 NME4O00746 187 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TOR1BO14657 336 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TBX19O60806 448 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SLC22A3O75751 556 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 CHEK2O96017 543 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 ZNF8P17098 575 aaPredicted RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 ME2P23368 584 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 VHLP40337 213 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 NUDT2P50583 147 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 DIO3P55073 304 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 MRPS21P82921 87 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SEMG2Q02383 582 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TCHHL1Q5QJ38 904 aaPredicted RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TRIM69Q86WT6 500 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 OR4K1Q8NGD4 311 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 OR8J3Q8NGG0 315 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 MARK4Q96L34 752 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 ACOX2Q99424 681 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 PKP4Q99569 1192 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TIMM29Q9BSF4 260 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 RPP25Q9BUL9 199 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TRMT61BQ9BVS5 477 aaKnown RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 C8orf33Q9H7E9 229 aaPredicted RBP6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SLC28A3Q9HAS3 691 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SERHLQ9NQF3 203 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 SLC2A4RGQ9NR83 387 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 CMTM6Q9NX76 183 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 RNF11Q9Y3C5 154 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 L3MBTL1Q9Y468 752 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 TIMM22Q9Y584 194 aa6.98□□□□□ -1.29
NPHP1-201ENST00000316534 MGAT4DA6NG13 374 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 RGS14O43566 566 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 PRICKLE3O43900 615 aaPredicted RBP6.97□□□□□ -1.29
NPHP1-201ENST00000316534 HLA-EP13747 358 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 XRCC1P18887 633 aaPredicted RBP6.97□□□□□ -1.29
NPHP1-201ENST00000316534 ATP6V1C1P21283 382 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 HTR1EP28566 365 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 CLDN8P56748 225 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 KIAA1024LP59773 190 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 RAE1P78406 368 aaKnown RBP6.97□□□□□ -1.29
NPHP1-201ENST00000316534 BNIP2Q12982 314 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 RBBP7Q16576 425 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 LRRC73Q5JTD7 316 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 LCTLQ6UWM7 567 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 LRRC74BQ6ZQY2 392 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 MILR1Q7Z6M3 343 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 SLC15A3Q8IY34 581 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 ALDH16A1Q8IZ83 802 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 DENND6BQ8NEG7 585 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 LRRC58Q96CX6 371 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 DCUN1D1Q96GG9 259 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 RHBGQ9H310 441 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 WASH6PQ9NQA3 447 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 DNAJC11Q9NVH1 559 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 SPATA7Q9P0W8 599 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 ZNF639Q9UID6 485 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 PSMD13Q9UNM6 376 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 TRIM64A6NGJ6 449 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 AQP12BA6NM10 295 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 SCN2BO60939 215 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 CIB2O75838 187 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 PRPS2P11908 318 aa6.97□□□□□ -1.29
NPHP1-201ENST00000316534 AMD1P17707 334 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms