RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLC38A9Q8NBW4 561 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 ANKRD49Q8WVL7 239 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 KLHL6Q8WZ60 621 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 SEC14L1Q92503 715 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 FAM167BQ9BTA0 163 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 RAB17Q9H0T7 212 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 ZNF768Q9H5H4 540 aaKnown RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 TFB2MQ9H5Q4 396 aaKnown RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 POMT2Q9UKY4 750 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 DHRS7Q9Y394 339 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 ANKRD12Q6UB98 2062 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 ZFYVE26Q68DK2 2539 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 PIPSLA2A3N6 862 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 ISM1B1AKI9 464 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 HGSO14964 777 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 MATN4O95460 622 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 TTC4O95801 387 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 TSPAN12O95859 305 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 NTRK1P04629 796 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 FAM153BP0C7A2 387 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 MYBL2P10244 700 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 CD9P21926 228 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 SNRPNP63162 240 aaKnown RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 MGAT5Q09328 741 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 PHKG1Q16816 387 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 KBTBD12Q3ZCT8 623 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 FAM153CQ494X1 144 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 RNF187Q5TA31 235 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 CLEC14AQ86T13 490 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 ZC3HC1Q86WB0 502 aaKnown RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 LRRC6Q86X45 466 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 RBM12BQ8IXT5 1001 aaKnown RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 SHISA5Q8N114 240 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 FBF1Q8TES7 1133 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 KCNJ9Q92806 393 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 PKP4Q99569 1192 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 MVB12BQ9H7P6 319 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 ZFATQ9P243 1243 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 STOX2Q9P2F5 926 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-201ENST00000311943 DKK4Q9UBT3 224 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 EPHA6Q9UF33 1036 aa11.65□□□□□ -0.54
SCFD1-201ENST00000311943 BOD1L1Q8NFC6 3051 aa11.65□□□□□ -0.55
SCFD1-201ENST00000311943 A0A1W2PPV9 198 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 H3BMM5 538 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 SYF2O95926 243 aaKnown RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 NELFEP18615 380 aaKnown RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 MAGP20916 626 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 CDH3P22223 829 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 PKLRP30613 574 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 TAS2R39P59534 338 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 MC2RQ01718 297 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 TLE3Q04726 772 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 TSTA3Q13630 321 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 PLEKHS1Q5SXH7 462 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 LCN10Q6JVE6 187 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 PWWP2BQ6NUJ5 590 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 FAM199XQ6PEV8 388 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 CDHR3Q6ZTQ4 885 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 SNIP1Q8TAD8 396 aaKnown RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 LRRC39Q96DD0 335 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 ZDHHC12Q96GR4 267 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 SLC41A2Q96JW4 573 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 TRAPPC9Q96Q05 1148 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 MCMBPQ9BTE3 642 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 THSD1Q9NS62 852 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 SH2B3Q9UQQ2 575 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 KLHL33A6NCF5 533 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 PHGDHO43175 533 aaKnown RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 TRA2AQ13595 282 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 FBXO48Q5FWF7 155 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 KIAA1614Q5VZ46 1190 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 CALML6Q8TD86 181 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 ZNF578Q96N58 590 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 MIPEPQ99797 713 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 NAT9Q9BTE0 207 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 SPRY4Q9C004 299 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 RAB33BQ9H082 229 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 CCDC68Q9H2F9 335 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 STARD5Q9NSY2 213 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 SOHLH2Q9NX45 425 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 NFU1Q9UMS0 254 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 HEBP2Q9Y5Z4 205 aa11.64□□□□□ -0.55
SCFD1-201ENST00000311943 MRPS18BQ9Y676 258 aaKnown RBP11.64□□□□□ -0.55
SCFD1-201ENST00000311943 POLR1CO15160 346 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-201ENST00000311943 NVLO15381 856 aaKnown RBP11.63□□□□□ -0.55
SCFD1-201ENST00000311943 ZW10O43264 779 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 PRICKLE3O43900 615 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-201ENST00000311943 SLC16A8O95907 504 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 STATHP02808 62 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 ANKRD34CP0C6C1 535 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 F8A1P23610 371 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 NDUFS1P28331 727 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 PCBP4P57723 403 aaKnown RBP11.63□□□□□ -0.55
SCFD1-201ENST00000311943 ERVPABLB-1P60509 514 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 EIF3IQ13347 325 aaKnown RBP11.63□□□□□ -0.55
SCFD1-201ENST00000311943 TUBB3Q13509 450 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 TMED2Q15363 201 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 C18orf21Q32NC0 220 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms