RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 VN1R5Q7Z5H4 357 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 GALNT4Q8N4A0 578 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ISG20Q96AZ6 181 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CLPTM1LQ96KA5 538 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 HOXD1Q9GZZ0 328 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 MINDY3Q9H8M7 445 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 MAGEE1Q9HCI5 957 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 FKBP14Q9NWM8 211 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ZDHHC9Q9Y397 364 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM14AQ9Y6G1 99 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PAPPAQ13219 1627 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NT5C1B-RDH14C9J2C7 533 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PDCD5O14737 125 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 FSCN2O14926 492 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CLOCKO15516 846 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 DHX15O43143 795 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NUAK1O60285 661 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SCN2BO60939 215 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TCEA3O75764 348 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 MAP3K6O95382 1288 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RAB36O95755 333 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 GSRP00390 522 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 IQCF3P0C7M6 154 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CSNK2A2P19784 350 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CST5P28325 142 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ZBTB6Q15916 424 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM220Q6QAJ8 160 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RALGPS2Q86X27 583 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 KLHL32Q96NJ5 620 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RTKNQ9BST9 563 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM121BQ9BXQ6 578 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF304Q9HCX3 659 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SNX15Q9NRS6 342 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PLCL2Q9UPR0 1127 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SAMHD1Q9Y3Z3 626 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SPEF1Q9Y4P9 236 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 A0A1W2PRU2 124 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SLITRK5O94991 958 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RCBTB2O95199 551 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CHRNA1P02708 482 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 HMGN1P05114 100 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 FOSL2P15408 326 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 BMPR1AP36894 532 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RPL6Q02878 288 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ST3GAL3Q11203 375 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RCAN2Q14206 197 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 LIPJQ5W064 366 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PGM2L1Q6PCE3 622 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 GJB7Q6PEY0 223 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RNF44Q7L0R7 432 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 VASH1Q7L8A9 365 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PIM3Q86V86 326 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SERPINA9Q86WD7 417 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PAQR7Q86WK9 346 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF321PQ8N8H1 164 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CLEC1AQ8NC01 280 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SLC22A8Q8TCC7 542 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 BRI3BPQ8WY22 251 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SLCO2A1Q92959 643 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SLC4A9Q96Q91 983 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM209Q96SK2 561 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF184Q99676 751 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RHOBTB2Q9BYZ6 727 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 WDR12Q9GZL7 423 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TAS2R7Q9NYW3 318 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NDRG2Q9UN36 371 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PLLPQ9Y342 182 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 HCN4Q9Y3Q4 1203 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 LYVE1Q9Y5Y7 322 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CASP8AP2Q9UKL3 1982 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 C2CD4BA6NLJ0 364 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PRAMEF26H0Y7S4 382 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 WRBO00258 174 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ABLIM1O14639 778 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SLC16A5O15375 505 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NRP2O60462 931 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NBNO60934 754 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ADAMTS4O75173 837 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RBMXL2O75526 392 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ARHGEF15O94989 841 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NTRK1P04629 796 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 GALTP07902 379 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ANXA8P13928 327 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 IRF2P14316 349 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TPH1P17752 444 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 IL12RB1P42701 662 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 IDH2P48735 452 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 YPEL5P62699 121 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RPL38P63173 70 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 C2orf80Q0P641 193 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM35AQ53FP2 167 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NAIF1Q69YI7 327 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM154Q6P9G4 183 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ENPP7Q6UWV6 458 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 GCNT7Q6ZNI0 430 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 MON1BQ7L1V2 547 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ARL14Q8N4G2 192 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ARL14EPQ8N8R7 260 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 HMGB4Q8WW32 186 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms