RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 NAA20P61599 178 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 MTAPQ13126 283 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 RBBP7Q16576 425 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PYCR3Q53H96 274 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 KANK2Q63ZY3 851 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 KIAA0895LQ68EN5 471 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 LETMD1Q6P1Q0 360 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CCDC121Q6ZUS5 278 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CHST15Q7LFX5 561 aaPredicted RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CLNKQ7Z7G1 428 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 SPEM1Q8N4L4 309 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 TEX9Q8N6V9 391 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 OR56A4Q8NGH8 313 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 MCOLN3Q8TDD5 553 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PDXPQ96GD0 296 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 MAELQ96JY0 434 aaKnown RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 RILPQ96NA2 401 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CDK15Q96Q40 435 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 ZNF382Q96SR6 550 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 GPR174Q9BXC1 333 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 DPEP2Q9H4A9 486 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 NOL11Q9H8H0 719 aaKnown RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 ARMCX1Q9P291 453 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 VTI1BQ9UEU0 232 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 ZFP69BQ9UJL9 534 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 DNAJC15Q9Y5T4 150 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PTGDR2Q9Y5Y4 395 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 ST14Q9Y5Y6 855 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 DNMT3AQ9Y6K1 912 aaPredicted RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 SLCO1B1Q9Y6L6 691 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PRSS38A1L453 326 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 E9PBE3 544 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 K7EPI3 171 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 AZIN1O14977 448 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 KLHL41O60662 606 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 STK16O75716 305 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 OR4F21O95013 312 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 ESRRBO95718 433 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 MLYCDO95822 493 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CATP04040 527 aaKnown RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 SERPINA6P08185 405 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 HIST1H2AGP0C0S8 130 aaPredicted RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 HIST1H2ADP20671 130 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 IMPA1P29218 277 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 AKT2P31751 481 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 RPS9P46781 194 aaKnown RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 INHBCP55103 352 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 AP1S2P56377 157 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CORO7P57737 925 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PLOD1Q02809 727 aaPredicted RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 DMPKQ09013 629 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 TRAF3Q13114 568 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 NFATC4Q14934 902 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PTCHD3Q3KNS1 767 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 LSM12Q3MHD2 195 aaKnown RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 METRNLQ641Q3 311 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 GPRIN3Q6ZVF9 776 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PDZD3Q86UT5 571 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CLYBLQ8N0X4 340 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 FBXO15Q8NCQ5 510 aaPredicted RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 STON2Q8WXE9 905 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 OR1E3Q8WZA6 343 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PYCR2Q96C36 320 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 BIRC7Q96CA5 298 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 FBXL8Q96CD0 374 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 FAR2Q96K12 515 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 HIST1H2AHQ96KK5 128 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 C3orf30Q96M34 536 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PKP4Q99569 1192 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 HIST1H2AJQ99878 128 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 ORAI3Q9BRQ5 295 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 TIMM29Q9BSF4 260 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 H2AFJQ9BTM1 129 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 TRIM54Q9BYV2 358 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 ATG10Q9H0Y0 220 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 TUBB1Q9H4B7 451 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CAAP1Q9H8G2 361 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 IPPKQ9H8X2 491 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 MEAF6Q9HAF1 191 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 TCF7L2Q9NQB0 619 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 STOX2Q9P2F5 926 aaPredicted RBP6.78□□□□□ -1.32
PTCD2-201ENST00000308077 OPTCQ9UBM4 332 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 MOSPD1Q9UJG1 213 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 PSMD13Q9UNM6 376 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 KCNK6Q9Y257 313 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 TIMM22Q9Y584 194 aa6.78□□□□□ -1.32
PTCD2-201ENST00000308077 CEP192Q8TEP8 1941 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 PIP5K1BO14986 540 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 ZNF217O75362 1048 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 APBB3O95704 486 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 PDGFBP01127 241 aaPredicted RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 T-ENOLP0DO92 83 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 RPL10P27635 214 aaKnown RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 MAP4P27816 1152 aaKnown RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 OXTRP30559 389 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 MAPK9P45984 424 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 GNPDA1P46926 289 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 HNMTP50135 292 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 BNIP1Q12981 228 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 RPA4Q13156 261 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms