RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 FAM26DQ5JW98 314 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 BROXQ5VW32 411 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 CREG2Q8IUH2 290 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 HID1Q8IV36 788 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 VN1R2Q8NFZ6 395 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PIWIL2Q8TC59 973 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GPR152Q8TDT2 470 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SERTAD3Q9UJW9 196 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 STOML2Q9UJZ1 356 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 TELO2Q9Y4R8 837 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 COL11A2P13942 1736 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SSC5DA1L4H1 1573 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF726A6NNF4 738 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 USP27XA6NNY8 438 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 CLDN9O95484 217 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SNRPB2P08579 225 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RPL38P63173 70 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PTCHD4Q6ZW05 846 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 KCTD8Q6ZWB6 473 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PACS2Q86VP3 889 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 FUKQ8N0W3 1084 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PIH1D2Q8WWB5 315 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 EPB41L1Q9H4G0 881 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 NOL6Q9H6R4 1146 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SDHAF3Q9NRP4 125 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ZDHHC3Q9NYG2 299 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SAMHD1Q9Y3Z3 626 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 METTL21EPA6NDL7 271 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 BTN3A2P78410 334 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 FNBP1LQ5T0N5 605 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SYVN1Q86TM6 617 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 MREGQ8N565 214 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF527Q8NB42 609 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 CHST4Q8NCG5 386 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM174Q8WUU8 243 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 HMCESQ96FZ2 354 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 NDC1Q9BTX1 674 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 TMBIM4Q9HC24 238 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RSL24D1Q9UHA3 163 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 FAM172BPA6NC97 362 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 REM1O75628 298 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ITGBL1O95965 494 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 HBQ1P09105 142 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 TFEBP19484 476 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF805Q5CZA5 627 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 MS4A13Q5J8X5 152 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 HECTD2Q5U5R9 776 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 FRRS1Q6ZNA5 592 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 PTGR2Q8N8N7 351 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GLB1L3Q8NCI6 653 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GDPD5Q8WTR4 605 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 RFKQ969G6 155 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GAL3ST4Q96RP7 486 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 LGMNQ99538 433 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 TRIM39Q9HCM9 518 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 MYO16Q9Y6X6 1858 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 FFAR3O14843 346 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ALOX15BO15296 676 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GPR42O15529 346 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 KDELR3O43731 214 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 FSBPO95073 299 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 DHFRP00374 187 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ITGA2BP08514 1039 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF37AP17032 561 aaPredicted RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 EIF2B2P49770 351 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 WASHC2DQ5SRD0 308 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 CWF19L1Q69YN2 538 aaKnown RBP8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC9A4Q6AI14 798 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 GLIS3Q8NEA6 775 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 AIFM2Q9BRQ8 373 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC40A1Q9NP59 571 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 TCAF1Q9Y4C2 921 aa8.18□□□□□ -1.1
PCDHB1-201ENST00000306549 BBIP1A8MTZ0 92 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 C9IYK1 514 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 M0QZQ0 153 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 PSMD11O00231 422 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 PAPSS1O43252 624 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 HCN1O60741 890 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SDHBP21912 280 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 C5orf22Q49AR2 442 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 EIPR1Q53HC9 387 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TCHHL1Q5QJ38 904 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RALGPS2Q86X27 583 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TOP1MTQ969P6 601 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 OXNAD1Q96HP4 312 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RTP3Q9BQQ7 232 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 DUSP23Q9BVJ7 150 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 PRKAB1Q9Y478 270 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TUBGCP6Q96RT7 1819 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 PTPRFP10586 1907 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TEX13CA0A0J9YWL9 993 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TTC34A8MYJ7 566 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 KAT7O95251 611 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ZCCHC18P0CG32 403 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ANPEPP15144 967 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 NTSR1P30989 418 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 CAPZA1P52907 286 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 KCNC3Q14003 757 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TEAD2Q15562 447 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC1A5Q15758 541 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms