RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 NEDD8Q15843 81 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SPATS1Q496A3 300 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CYBRD1Q53TN4 286 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ARSIQ5FYB1 569 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 KIAA0408Q6ZU52 694 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 GLT6D1Q7Z4J2 308 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 PTAR1Q7Z6K3 402 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 STRA8Q7Z7C7 330 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZC3HC1Q86WB0 502 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 HEATR4Q86WZ0 1026 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 DCP2Q8IU60 420 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 PLD6Q8N2A8 252 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 LSM14AQ8ND56 463 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 OR4K2Q8NGD2 314 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CANT1Q8WVQ1 401 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 LYSMD1Q96S90 227 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 FAM129BQ96TA1 746 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 RBBP8Q99708 897 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ATP13A3Q9H7F0 1226 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 UBE2ZQ9H832 354 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 NMRAL1Q9HBL8 299 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZNF358Q9NW07 568 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SMPD3Q9NY59 655 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 IL17CQ9P0M4 197 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 LIMD1Q9UGP4 676 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZNF639Q9UID6 485 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 MTF2Q9Y483 593 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 FAM172BPA6NC97 362 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SAC3D1A6NKF1 404 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 TRPC5OSA6NMA1 111 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 PHGDHO43175 533 aaKnown RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 SPINT1O43278 529 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SCO2O43819 266 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 KAT7O95251 611 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CLDN7O95471 211 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 GOT2P00505 430 aaKnown RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 CHRNGP07510 517 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CHRNB1P11230 501 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 FASP25445 335 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SPRP35270 261 aaPredicted RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 IL12RB1P42701 662 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 KIR2DL1P43626 348 aaPredicted RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 LIMK2P53671 638 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ENPP2Q13822 863 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 INPP5AQ14642 412 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ITPRIPL2Q3MIP1 535 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ATAD3BQ5T9A4 648 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ARMC12Q5T9G4 340 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 TMEM198Q66K66 360 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CRTC1Q6UUV9 634 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 BTLAQ7Z6A9 289 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SDR16C5Q8N3Y7 309 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SLC44A3Q8N4M1 653 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CPA6Q8N4T0 437 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 DCLK2Q8N568 766 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 PEX13Q92968 403 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SCRN2Q96FV2 425 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ATXN7L3BQ96GX2 97 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 MED30Q96HR3 178 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 FBXL20Q96IG2 436 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 UBXN10Q96LJ8 280 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 MCCC1Q96RQ3 725 aaPredicted RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 SH3GL1Q99961 368 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CAB39LQ9H9S4 337 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 FANCEQ9HB96 536 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ZDHHC2Q9UIJ5 367 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ENPP5Q9UJA9 477 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 RIMKLBQ9ULI2 386 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ANKRD6Q9Y2G4 727 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ST14Q9Y5Y6 855 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ISPDA4D126 451 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 TBC1D3BA6NDS4 549 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SDHDO14521 159 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 UGT2B11O75310 529 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 S1PR4O95977 384 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 IL10P22301 178 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 EIF2DP41214 584 aaKnown RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 KRT6CP48668 564 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CHRNEQ04844 493 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 SELPLGQ14242 412 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 AASDHQ4L235 1098 aaPredicted RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 C2orf27AQ580R0 203 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ARL13AQ5H913 290 aaPredicted RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 RBM48Q5RL73 367 aaKnown RBP6.51□□□□□ -1.37
TMC1-201ENST00000297784 PERM1Q5SV97 790 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 LCN8Q6JVE9 175 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CNSTQ6PJW8 725 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 GDPD4Q6W3E5 623 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 PRR23CQ6ZRP0 262 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 GK5Q6ZS86 529 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 RFLNAQ6ZTI6 216 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 USP43Q70EL4 1123 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 MTSS1LQ765P7 747 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 AKAP14Q86UN6 197 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 C11orf74Q86VG3 221 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 ARMC8Q8IUR7 673 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CEP97Q8IW35 865 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 PIANPQ8IYJ0 282 aa6.51□□□□□ -1.37
TMC1-201ENST00000297784 CBARPQ8N350 705 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms