RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 FTMTQ8N4E7 242 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SLC25A41Q8N5S1 370 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 POU5F2Q8N7G0 328 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 NDNFQ8TB73 568 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RSPRY1Q96DX4 576 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 KCNS3Q9BQ31 491 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 COL20A1Q9P218 1284 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RGPD2P0DJD1 1756 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 PPP1R3GB7ZBB8 358 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ITM2AO43736 263 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 MBL2P11226 248 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 BMP1P13497 986 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ARL3P36405 182 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 AQP4P55087 323 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 POU4F2Q12837 409 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 DUPD1Q68J44 220 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RTL6Q6ICC9 239 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SNX20Q7Z614 316 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 DNAJC22Q8N4W6 341 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF808Q8N4W9 903 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ELMO3Q96BJ8 720 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SPIN2AQ99865 258 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SPIN2BQ9BPZ2 258 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SLC7A5P2Q9GIP4 190 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 WDCPQ9H6R7 721 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 IFT22Q9H7X7 185 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 IL26Q9NPH9 171 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 NAALAD2Q9Y3Q0 740 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ERVK-7P63135 1459 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 DPYSL4O14531 572 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 NPC1O15118 1278 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SLC11A2P49281 568 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TAS2R50P59544 299 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SPIBQ01892 262 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 PPP3CAQ08209 521 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SSX7Q7RTT5 188 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ZSWIM2Q8NEG5 633 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SMPDL3AQ92484 453 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RAB39BQ96DA2 213 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 FBXO7Q9Y3I1 522 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 CMAHPQ9Y471 501 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RGPD3A6NKT7 1758 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RGPD4Q7Z3J3 1758 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 EGFRP00533 1210 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 GNRH1P01148 92 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TPSB2P20231 275 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ENDOUP21128 410 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 BST1Q10588 318 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TPSAB1Q15661 275 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 FIP1L1Q6UN15 594 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 MCOLN2Q8IZK6 566 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 CPXCR1Q8N123 301 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 OR7G3Q8NG95 312 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 OR10A6Q8NH74 314 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SLC13A3Q8WWT9 602 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF578Q96N58 590 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TREX2Q9BQ50 279 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 NIPSNAP3BQ9BS92 247 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TLR8Q9NR97 1041 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RBMX2Q9Y388 322 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 PLEKHM1Q9Y4G2 1056 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 PNPLA6Q8IY17 1366 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 NKRFO15226 690 aaKnown RBP eCLIP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 EIF6P56537 245 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 CYP2A13Q16696 494 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 IL27RAQ6UWB1 636 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 AHSA2Q719I0 299 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 AMIGO2Q86SJ2 522 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SCML4Q8N228 414 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 KCNRGQ8N5I3 272 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TXNDC5Q8NBS9 432 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 IPMKQ8NFU5 416 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SPOCK2Q92563 424 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 OR52E6Q96RD3 313 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 PCBD2Q9H0N5 130 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 FAM49AQ9H0Q0 323 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 DNTTIP1Q9H147 329 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TPK1Q9H3S4 243 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 DPEP2Q9H4A9 486 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 B3GNT2Q9NY97 397 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 A3GALT2U3KPV4 340 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 F8W036 122 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 IMPA2O14732 288 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 PPP1R2P9O14990 202 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ALOX15BO15296 676 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TBX10O75333 385 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 CCNYL3P0C7X3 344 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 MAOBP27338 520 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RPL21P46778 160 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 GK2Q14410 553 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 LIX1LQ8IVB5 337 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 PLD5Q8N7P1 536 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF781Q8N8C0 355 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 OR5K1Q8NHB7 308 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 MRPS33Q9Y291 106 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TECTAO75443 2155 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 CLTCQ00610 1675 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 EFCAB6Q5THR3 1501 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 BHMG1C9JSJ3 638 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 CHRNB1P11230 501 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms