RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 KIAA1614Q5VZ46 1190 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 S100A13Q99584 98 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 ADAM7Q9H2U9 754 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 C3orf14Q9HBI5 128 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 POLR3BQ9NW08 1133 aaPredicted RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 ATPIF1Q9UII2 106 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 MSI1O43347 362 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 GSTM3P21266 225 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 MPP2Q14168 576 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 ZBTB2Q8N680 514 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 BIRC7Q96CA5 298 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 GFM1Q96RP9 751 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 POPDC3Q9HBV1 291 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 TMPRSS4Q9NRS4 437 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 AGO1Q9UL18 857 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 CYP7B1O75881 506 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 GADD45GO95257 159 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 MPPE1Q53F39 396 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 SYVN1Q86TM6 617 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 ELMOD2Q8IZ81 293 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 LIX1Q8N485 282 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 LMO3Q8TAP4 145 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 SIPA1Q96FS4 1042 aa17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 AGO3Q9H9G7 860 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 RUVBL1Q9Y265 456 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-201ENST00000289272 TREHO43280 583 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 FAM163BP0C2L3 166 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 HTR1EP28566 365 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 TCEA2Q15560 299 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNHIT3Q15649 155 aaPredicted RBP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 GPAT3Q53EU6 434 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 OR10G2Q8NGC3 310 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 COPS8Q99627 209 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 AKTIPQ9H8T0 292 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 LIN28AQ9H9Z2 209 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 TXNRD3NBQ6F5E7 133 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 EIF5AL1Q6IS14 154 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 SERPINA13PQ6UXR4 307 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 TRAPPC5Q8IUR0 188 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 MFSD1Q9H3U5 465 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 SEC14L3Q9UDX4 400 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 A0A1W2PQH9 124 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 A8MT66 165 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 PTGER3P43115 390 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 NFATC3Q12968 1075 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 PNCKQ6P2M8 343 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 OR8J3Q8NGG0 315 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 PIGXQ8TBF5 258 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 AKAP1Q92667 903 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 CAMK1GQ96NX5 476 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 BPIFA1Q9NP55 256 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 TIMM22Q9Y584 194 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 OAS3Q9Y6K5 1087 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 CXorf49A8MYA2 514 aaPredicted RBP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 MID1O15344 667 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 OR1D2P34982 312 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 PBX3P40426 434 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 TXNL4AP83876 142 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 NDUFA9Q16795 377 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 NPAS4Q8IUM7 802 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 OR8D1Q8WZ84 308 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 DDX1Q92499 740 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 PYURFQ96I23 114 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC29A3Q9BZD2 475 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 UBQLN2Q9UHD9 624 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC27A5Q9Y2P5 690 aa17.18■□□□□ 0.34
PCDHA13-201ENST00000289272 GRM6O15303 877 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 SNNO75324 88 aaPredicted RBP17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 RFPL1O75677 317 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF311Q5JNZ3 666 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 C6orf141Q5SZD1 244 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 IRAK1BP1Q5VVH5 260 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 OLFML2AQ68BL7 652 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC25A24Q6NUK1 477 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 KLHL36Q8N4N3 616 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 TSSK3Q96PN8 268 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 CDH12P55289 794 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 DAOAP59103 153 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 ABHD18Q0P651 414 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 DNASE1L3Q13609 305 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 TMEM17Q86X19 198 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC37A3Q8NCC5 494 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 ZC3H10Q96K80 434 aaKnown RBP17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 TOR3AQ9H497 397 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 ZDHHC2Q9UIJ5 367 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 A8MX80 341 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 H7C2Y5 167 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 HIST1H2ABP04908 130 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC25A11Q02978 314 aaKnown RBP17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 EML3Q32P44 896 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 TBRG1Q3YBR2 411 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 UBE2R2Q712K3 238 aaPredicted RBP17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 HIST3H2AQ7L7L0 130 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 HIST1H2ACQ93077 130 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 NUP50Q9UKX7 468 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 MTHFD1P11586 935 aaKnown RBP17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 SMPD1P17405 629 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 MTMR10Q9NXD2 777 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms