RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 WASP42768 502 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 MAPK9P45984 424 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 GALK1P51570 392 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 ENPP2Q13822 863 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 NFYCQ13952 458 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 CAPRIN1Q14444 709 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 IMPG1Q17R60 797 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 SPATS1Q496A3 300 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 PIP5KL1Q5T9C9 394 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 PRAMEF9Q5VWM5 478 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 CES5AQ6NT32 575 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 SPATA24Q86W54 205 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 KLHDC8AQ8IYD2 350 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 CFAP206Q8IYR0 622 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 PQLC1Q8N2U9 271 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 ATL1Q8WXF7 558 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 FGF14Q92915 247 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 ZNF184Q99676 751 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 TRMT61BQ9BVS5 477 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 ZCCHC2Q9C0B9 1178 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 LRTM1Q9HBL6 345 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 INTS7Q9NVH2 962 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 C1orf109Q9NX04 203 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 CMTM6Q9NX76 183 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 ASIC5Q9NY37 505 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 C6orf203Q9P0P8 240 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 GMPR2Q9P2T1 348 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 SNX6Q9UNH7 406 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 POLR3HQ9Y535 204 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 PCDHA9Q9Y5H5 950 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 SERTM1A2A2V5 107 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 VEGFDO43915 354 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 C8BP07358 591 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 HSD17B1P14061 328 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 JAK1P23458 1154 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 RPL38P63173 70 aaKnown RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 RHDQ02161 417 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 KIAA0040Q15053 153 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 CCSMST1Q4G0I0 132 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 HABP4Q5JVS0 413 aaKnown RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 LIPJQ5W064 366 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 LPCAT4Q643R3 524 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 AGTRAPQ6RW13 159 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 THOC6Q86W42 341 aaKnown RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 GALNT13Q8IUC8 556 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 DPP10Q8N608 796 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 NUDT8Q8WV74 236 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 SELENOMQ8WWX9 145 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 FOXJ1Q92949 421 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 ZUFSPQ96AP4 578 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 TMEM125Q96AQ2 219 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 DUS3LQ96G46 650 aaKnown RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF514Q96K75 400 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 LINC00615Q96LM1 132 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 MAGEB10Q96LZ2 347 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 FOPNLQ96NB1 174 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 PKP4Q99569 1192 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 GDF15Q99988 308 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 ECSITQ9BQ95 431 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 KLHL4Q9C0H6 718 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 STOX2Q9P2F5 926 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 GPR34Q9UPC5 381 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 LRRK1Q38SD2 2015 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 COL4A3Q01955 1670 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 C17orf113A0A1B0GUU1 675 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 PRSS51A0A1B0GVH4 220 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 TCRBV3S1A0A5B6 114 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 H3BM21 787 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 MID1O15344 667 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 AP1G1O43747 822 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 PEX1O43933 1283 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 DNAJA2O60884 412 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 POP7O75817 140 aaKnown RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 JUPP14923 745 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF8P17098 575 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 DRD3P35462 400 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 HALP42357 657 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 TNFRSF4P43489 277 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 NEK2P51955 445 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 CHIT1Q13231 466 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 CAMK2GQ13555 558 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 NAE1Q13564 534 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 GTF2H3Q13889 308 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 AAK1Q2M2I8 961 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 TIGD2Q4W5G0 525 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 SLC44A4Q53GD3 710 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 C6orf10Q5SRN2 563 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 CACHD1Q5VU97 1274 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 SLC2A7Q6PXP3 512 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 DHFR2Q86XF0 187 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 LIX1Q8N485 282 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 AADATQ8N5Z0 425 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 PLA2G15Q8NCC3 412 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 FBXO15Q8NCQ5 510 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 DNAJB14Q8TBM8 379 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 COX14Q96I36 57 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms