RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ZNF557Q8N988 423 aaPredicted RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 OR9I1Q8NGQ6 314 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 MAGEE2Q8TD90 523 aaPredicted RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 MAGED4Q96JG8 741 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 OMDQ99983 421 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 NDEL1Q9GZM8 345 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 CA14Q9ULX7 337 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 VWA7Q9Y334 891 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 B4GAT1O43505 415 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ABCB7O75027 752 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 GMNNO75496 209 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 EGFP01133 1207 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 HNRNPLP14866 589 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 LEPRP48357 1165 aaKnown RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ARCN1P48444 511 aaKnown RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 IFITM3Q01628 133 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 BNIP2Q12982 314 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 AQP6Q13520 282 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 DMC1Q14565 340 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 INAVAQ3KP66 663 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ZC3HC1Q86WB0 502 aaKnown RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 FRS2Q8WU20 508 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ACTR3BQ9P1U1 418 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 EGFL7Q9UHF1 273 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 IFT52Q9Y366 437 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 DENND4AQ7Z401 1863 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 MYO15AQ9UKN7 3530 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ANKRD36A6QL64 1941 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 BCAS1O75363 584 aaPredicted RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 CTSLP07711 333 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 TCEA1P23193 301 aaKnown RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ELK4P28324 431 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 OXTRP30559 389 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 PLA2G16P53816 162 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 LEXMQ3ZCV2 418 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ARMC12Q5T9G4 340 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 PIWIL3Q7Z3Z3 882 aaKnown RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
PRPF6-201ENST00000266079 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 FLCNQ8NFG4 579 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 OR13C4Q8NGS5 318 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 RHOJQ9H4E5 214 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ATP13A3Q9H7F0 1226 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 MAGEE1Q9HCI5 957 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ABCD2Q9UBJ2 740 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 ACOT9Q9Y305 439 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 DGKBQ9Y6T7 804 aa12.37□□□□□ -0.43
PRPF6-201ENST00000266079 LOC285095A0A1B0GVY8 99 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 OR51F1A6NGY5 319 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 H0YAE9 185 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 NDST3O95803 873 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 GPIP06744 558 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 HSD17B1P14061 328 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 TPTEP56180 551 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 PGS1Q32NB8 556 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 RETREG3Q86VR2 466 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 WFIKKN2Q8TEU8 576 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 S100ZQ8WXG8 99 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 FKBP10Q96AY3 582 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 GPR78Q96P69 363 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 TRIB3Q96RU7 358 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 HOPXQ9BPY8 73 aaPredicted RBP12.36□□□□□ -0.43
PRPF6-201ENST00000266079 SLC6A17Q9H1V8 727 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 PARVBQ9HBI1 364 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 ANKRD66B4E2M5 251 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 PSMD3O43242 534 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 SERPINA4P29622 427 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 AP1S1P61966 158 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 ALG1LQ6GMV1 187 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 PRMT9Q6P2P2 845 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 TPRG1Q6ZUI0 275 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 MMAAQ8IVH4 418 aaKnown RBP12.36□□□□□ -0.43
PRPF6-201ENST00000266079 SLC41A1Q8IVJ1 513 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 FUNDC1Q8IVP5 155 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 TXNDC5Q8NBS9 432 aaKnown RBP12.36□□□□□ -0.43
PRPF6-201ENST00000266079 NXNL1Q96CM4 212 aa12.36□□□□□ -0.43
PRPF6-201ENST00000266079 GPR39O43194 453 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 GFAPP14136 432 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 GSTM2P28161 218 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 DNAJB13P59910 316 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 DNASE1L3Q13609 305 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 TIGD2Q4W5G0 525 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 CRTC3Q6UUV7 619 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 LINC00299Q6ZSB3 139 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 LDB1Q86U70 411 aaPredicted RBP12.35□□□□□ -0.43
PRPF6-201ENST00000266079 TSPAN33Q86UF1 283 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 PPHLN1Q8NEY8 458 aaKnown RBP12.35□□□□□ -0.43
PRPF6-201ENST00000266079 OR6P1Q8NGX9 317 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 VMP1Q96GC9 406 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 MUS81Q96NY9 551 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 MRPL46Q9H2W6 279 aaKnown RBP12.35□□□□□ -0.43
PRPF6-201ENST00000266079 RMND5AQ9H871 391 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 NSMCE4AQ9NXX6 385 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF6-201ENST00000266079 MAP10Q9P2G4 905 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 MAGEB16A2A368 324 aa12.35□□□□□ -0.43
PRPF6-201ENST00000266079 BBIP1A8MTZ0 92 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms