RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 MKL2Q9ULH7 1088 aa13.9□□□□□ -0.18
SCARF1-201ENST00000263071 ANKRD6Q9Y2G4 727 aa13.9□□□□□ -0.18
SCARF1-201ENST00000263071 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 CIB4A0PJX0 185 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 NPPAP01160 153 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 GPR15P49685 360 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 KCNK10P57789 538 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 UBE3AQ05086 875 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 MFSD13AQ14CX5 517 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 PSMD5Q16401 504 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 KYAT1Q16773 422 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 BNIPLQ7Z465 357 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 TAGAPQ8N103 731 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 FNDC5Q8NAU1 212 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 OPALINQ96PE5 141 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 PITHD1Q9GZP4 211 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 HAPLN1P10915 354 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 BMP1P13497 986 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 PRKACGP22612 351 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 F8A1P23610 371 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 GEMP55040 296 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 MGAT3Q09327 533 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 FAPQ12884 760 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 ZNF404Q494X3 552 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 BCL7AQ4VC05 210 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 ANKRD34AQ69YU3 496 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 BRAT1Q6PJG6 821 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 MTFMTQ96DP5 389 aaKnown RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 RPRD1AQ96P16 312 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 NODALQ96S42 347 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 PIP5K1AQ99755 562 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 INTS7Q9NVH2 962 aaKnown RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 SNX6Q9UNH7 406 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 PDE10AQ9Y233 779 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 RAB19A4D1S5 217 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 BTN3A1O00481 513 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 FFAR3O14843 346 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 GSTA4O15217 222 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 GPR42O15529 346 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 AKR7A2O43488 359 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 THP07101 528 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 CYP4B1P13584 511 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 DGKQP52824 942 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 GPAT3Q53EU6 434 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 MARC1Q5VT66 337 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 THAP5Q7Z6K1 395 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 PLCZ1Q86YW0 608 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 C8orf59Q8N0T1 100 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 OR7D4Q8NG98 312 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 ZFAND1Q8TCF1 268 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 RAET1EQ8TD07 263 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 PTERQ96BW5 349 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 UHRF1Q96T88 793 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 THUMPD3Q9BV44 507 aaKnown RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 ALOXE3Q9BYJ1 711 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 AFF4Q9UHB7 1163 aaKnown RBP13.89□□□□□ -0.19
SCARF1-201ENST00000263071 GRIP1Q9Y3R0 1128 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 DNAJC15Q9Y5T4 150 aa13.89□□□□□ -0.19
SCARF1-201ENST00000263071 AGAP5A6NIR3 686 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 IQCF5A8MTL0 148 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 MUSKO15146 869 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 RASAL1O95294 804 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 POU3F3P20264 500 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 CAPZA2P47755 286 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 ERVK-8P63133 956 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 TSNQ15631 228 aaKnown RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 FAM187BQ17R55 369 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 TPRG1LQ5T0D9 272 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 CYS1Q717R9 158 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 PM20D2Q8IYS1 436 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 SKA2Q8WVK7 121 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 BTN2A3PQ96KV6 586 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 APOL4Q9BPW4 351 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 HDHD5Q9BXW7 423 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■□□□ 11.9
SCARF1-201ENST00000263071 C14orf119Q9NWQ9 140 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 PAK1IP1Q9NWT1 392 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 TAS2R7Q9NYW3 318 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 MEIOCA2RUB1 952 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 PTGESO14684 152 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 STX7O15400 261 aaKnown RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 SNAI1O95863 264 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 CHRNA1P02708 482 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 GRK4P32298 578 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 HTR7P34969 479 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 TPMTP51580 245 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 UFM1P61960 85 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 LIPEQ05469 1076 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 RFTN1Q14699 578 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-201ENST00000263071 KCTD11Q693B1 232 aa13.88□□□□□ -0.19
SCARF1-201ENST00000263071 NRARPQ7Z6K4 114 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms