RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ZNF548Q8NEK5 533 aaPredicted RBP26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 OR5AR1Q8NGP9 310 aa26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 C12orf66Q96MD2 445 aa26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 MRPL57Q9BQC6 102 aaKnown RBP26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 MRPL46Q9H2W6 279 aaKnown RBP26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 CAPN10Q9HC96 672 aa26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 IMP3Q9NV31 184 aaKnown RBP26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 ACSL5Q9ULC5 683 aa26.79■■□□□ 1.88
SMARCD3-201ENST00000262188 ARHGEF33A8MVX0 844 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 GUCA1CO95843 209 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 KCNA4P22459 653 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 RPA4Q13156 261 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 GSDMCQ9BYG8 508 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 NKIRAS1Q9NYS0 192 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 PDE10AQ9Y233 779 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 G3V2L1 256 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 EIF3FO00303 357 aaPredicted RBP26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 EPN2O95208 641 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 ZWINTO95229 277 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 PRKG2Q13237 762 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 C18orf21Q32NC0 220 aaPredicted RBP26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 PIGWQ7Z7B1 504 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 TFGQ92734 400 aaPredicted RBP26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 ELF4Q99607 663 aaPredicted RBP26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 RAB23Q9ULC3 237 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 ASF1AQ9Y294 204 aa26.78■■□□□ 1.88
SMARCD3-201ENST00000262188 SUPT3HB4E1H0 165 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 TM9SF1O15321 606 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 SUPT3HO75486 399 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 MTHFD2P13995 350 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 KLC1Q07866 573 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 HLA-BQ31612 363 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 UAP1L1Q3KQV9 507 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 NEK10Q6ZWH5 1172 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 GPSM1Q86YR5 675 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 FAM46DQ8NEK8 389 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 STAG3L4Q8TBR4 150 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 PLAGL1Q9UM63 463 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 G3BP2Q9UN86 482 aaKnown RBP26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 A6NCN8 305 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 GFYI3L273 518 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 KERAO60938 352 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 PSIP1O75475 530 aaKnown RBP26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 PIAS2O75928 621 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 ACADSP16219 412 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 HNRNPKP61978 463 aaKnown RBP eCLIP26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 PCLAFQ15004 111 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 DEFB133Q30KQ1 61 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 FRA10AC1Q70Z53 315 aa26.77■■□□□ 1.88
SMARCD3-201ENST00000262188 IFRD1O00458 451 aaPredicted RBP26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 AQP9O43315 295 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 KCNJ13O60928 360 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 RBP1P09455 135 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 PLOD1Q02809 727 aaPredicted RBP26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 TGFBIQ15582 683 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 CCDC153Q494R4 210 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 RINLQ6ZS11 566 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 GATAD2AQ86YP4 633 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 RASGRP3Q8IV61 690 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 ESAMQ96AP7 390 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 PHF21BQ96EK2 531 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 SPASTQ9UBP0 616 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 GMEB2Q9UKD1 530 aa26.76■■□□□ 1.87
SMARCD3-201ENST00000262188 CABIN1Q9Y6J0 2220 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 LRRC14BA6NHZ5 514 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 B4DGG1 531 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 DLL1O00548 723 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 YY2O15391 372 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 DLX3O60479 287 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 C1orf105O95561 183 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SERPINB4P48594 390 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 RPE65Q16518 533 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SH2D4BQ5SQS7 431 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 TRPM8Q7Z2W7 1104 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 ADAMTSL2Q86TH1 951 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 C10orf107Q8IVU9 208 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 RHEBL1Q8TAI7 183 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 JPH3Q8WXH2 748 aaPredicted RBP26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 HGH1Q9BTY7 390 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 CCDC28BQ9BUN5 200 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 ZNF624Q9P2J8 865 aaPredicted RBP26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 COPG2Q9UBF2 871 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 FFAR2O15552 330 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 DHRS4L1P0CG22 281 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 CPA3P15088 417 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 HOXD12P35452 270 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 KPNA2P52292 529 aaKnown RBP26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SLC23A3Q6PIS1 610 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SLC25A45Q8N413 288 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SUMF1Q8NBK3 374 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 FOPNLQ96NB1 174 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 GTPBP2Q9BX10 602 aaKnown RBP26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SLC12A9Q9BXP2 914 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 GAREM1Q9H706 876 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 ERVMER34-1Q9H9K5 563 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SIRPGQ9P1W8 387 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 SLC6A14Q9UN76 642 aa26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 TDRKHQ9Y2W6 561 aaKnown RBP26.75■■□□□ 1.87
SMARCD3-201ENST00000262188 C8GP07360 202 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 ELOCQ15369 112 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms