RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 VEGFDO43915 354 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CCDC22O60826 627 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CBX6O95503 412 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CER1O95813 267 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 FGF4P08620 206 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 HNRNPA2B1P22626 353 aaKnown RBP17.03■□□□□ 0.32
SRSF1-201ENST00000258962 PREPP48147 710 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CDK3Q00526 305 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 SP140Q13342 867 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 KIF19Q2TAC6 998 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 UGT3A2Q3SY77 523 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CLEC6AQ6EIG7 209 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 SULT1C3Q6IMI6 304 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 TRAPPC5Q8IUR0 188 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 KIRREL3Q8IZU9 778 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 MFSD2AQ8NA29 543 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 UBTD2Q8WUN7 234 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 RHBDF1Q96CC6 855 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 MAELQ96JY0 434 aaKnown RBP17.03■□□□□ 0.32
SRSF1-201ENST00000258962 FAR2Q96K12 515 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CCDC106Q9BWC9 280 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 LGR4Q9BXB1 951 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 SLC12A9Q9BXP2 914 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 TCF7L2Q9NQB0 619 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 SAR1AQ9NR31 198 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 ARL8BQ9NVJ2 186 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 DLL3Q9NYJ7 618 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 SPTBN4Q9H254 2564 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CFAP73A6NFT4 308 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 SLC16A5O15375 505 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 SKAP2O75563 359 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 DNAJC8O75937 253 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 UNC5CO95185 931 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 PAK4O96013 591 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 ENO2P09104 434 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 TEAD1P28347 426 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 EPHA3P29320 983 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 INHBCP55103 352 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 FOXA1P55317 472 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 GTF2H3Q13889 308 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 UBAP2LQ14157 1087 aaKnown RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 HLA-BQ31612 363 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 LSM12Q3MHD2 195 aaKnown RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 SYTL3Q4VX76 610 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 KANK2Q63ZY3 851 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 LAYNQ6UX15 382 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 SYVN1Q86TM6 617 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 TREML1Q86YW5 311 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 OR2I1PQ8NGU4 316 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 SKA2Q8WVK7 121 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 LINC00615Q96LM1 132 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 EGFL8Q99944 293 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 MYOCQ99972 504 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 HGH1Q9BTY7 390 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 C1QTNF7Q9BXJ2 289 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 TEX101Q9BY14 249 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 GAREM1Q9H706 876 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 ZNF225Q9UK10 706 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 TMEM98Q9Y2Y6 226 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 TNPO3Q9Y5L0 923 aaKnown RBP17.02■□□□□ 0.32
SRSF1-201ENST00000258962 SNX11Q9Y5W9 270 aa17.02■□□□□ 0.32
SRSF1-201ENST00000258962 A0A1W2PR77 199 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 TRPC5OSA6NMA1 111 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 E9PBE3 544 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 TLR4O00206 839 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 KLHL41O60662 606 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 MATN4O95460 622 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 PRDX3P30048 256 aaKnown RBP17.01■□□□□ 0.31
SRSF1-201ENST00000258962 HSPA7P48741 367 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 CDKL1Q00532 357 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 INPP5AQ14642 412 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 KRT72Q14CN4 511 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 CDKL4Q5MAI5 379 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 CRTC3Q6UUV7 619 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 GOLGA7Q7Z5G4 137 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 C11orf96Q7Z7L8 435 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 IQCHQ86VS3 1027 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 SLC22A15Q8IZD6 547 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 CLYBLQ8N0X4 340 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 AFAP1L2Q8N4X5 818 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 ASB12Q8WXK4 309 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 TMEM159Q96B96 161 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 KLHDC7BQ96G42 594 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 ZNF514Q96K75 400 aaPredicted RBP17.01■□□□□ 0.31
SRSF1-201ENST00000258962 KCNA7Q96RP8 456 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 CCDC28BQ9BUN5 200 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 MEAF6Q9HAF1 191 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 PARVBQ9HBI1 364 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 GPR34Q9UPC5 381 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 ADAMTS9Q9P2N4 1935 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 AZIN1O14977 448 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 CHUKO15111 745 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 DFNA5O60443 496 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 MLYCDO95822 493 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 WNT1P04628 370 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 GSTM1P09488 218 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 PDHA2P29803 388 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 IGFALSP35858 605 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 TRIM23P36406 574 aa17.01■□□□□ 0.31
SRSF1-201ENST00000258962 RPIAP49247 311 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms