RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 TSEN34Q9BSV6 310 aaKnown RBP14.06□□□□□ -0.16
SDC1-201ENST00000254351 KRT84Q9NSB2 600 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 SEC22BO75396 215 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 COL6A1P12109 1028 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 HCAR3P49019 387 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 MXD1Q05195 221 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 ACOX1Q15067 660 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 PTCHD3Q3KNS1 767 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 Q5BKY6 102 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 ZNF484Q5JVG2 852 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 ARMC4Q5T2S8 1044 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 HORMAD1Q86X24 394 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 ELMOD2Q8IZ81 293 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 LIX1Q8N485 282 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 OR4F6Q8NGB9 312 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 UTP15Q8TED0 518 aaKnown RBP14.06□□□□□ -0.16
SDC1-201ENST00000254351 INPP5KQ9BT40 448 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 ITPAQ9BY32 194 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 PRELID1Q9Y255 219 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 KLHL20Q9Y2M5 609 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 METTL15A6NJ78 407 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 M0QX08 132 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 KERAO60938 352 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 HPRP00739 348 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 GRK3P35626 688 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 GPLD1P80108 840 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 GALK2Q01415 458 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 SMARCB1Q12824 385 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 IRF3Q14653 427 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 CYP27C1Q4G0S4 372 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 ALFQ53S48 1182 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 INTS6LQ5JSJ4 861 aaKnown RBP14.06□□□□□ -0.16
SDC1-201ENST00000254351 WDR45BQ5MNZ6 344 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 GPSM1Q86YR5 675 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 RIOX2Q8IUF8 465 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 AMER2Q8N7J2 671 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 PJA1Q8NG27 643 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 OR56A4Q8NGH8 313 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 TTPALQ9BTX7 342 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 DPY30Q9C005 99 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 MFSD1Q9H3U5 465 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 TAS2R9Q9NYW1 312 aa14.06□□□□□ -0.16
SDC1-201ENST00000254351 E9PAM4 449 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 SLC7A4O43246 635 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 F9P00740 461 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 STSP08842 583 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 DNAJB2P25686 324 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 HTR2BP41595 481 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 HTR3AP46098 478 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 ARHGDIAP52565 204 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 DEFA1P59665 94 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 DEFA3P59666 94 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 RPP38P78345 283 aaKnown RBP14.05□□□□□ -0.16
SDC1-201ENST00000254351 CDC20Q12834 499 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 MED22Q15528 200 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 LRRC26Q2I0M4 334 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 ZNF181Q2M3W8 571 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 PLEKHG6Q3KR16 790 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 RUNDC3AQ59EK9 446 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 MARCH8Q5T0T0 291 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 PM20D1Q6GTS8 502 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 MOB2Q70IA6 237 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 EFL1Q7Z2Z2 1120 aaKnown RBP14.05□□□□□ -0.16
SDC1-201ENST00000254351 MIB1Q86YT6 1006 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 OR4K2Q8NGD2 314 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 TSSK3Q96PN8 268 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 TOR4AQ9NXH8 423 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 TAS2R13Q9NYV9 303 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 H3BM21 787 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 HAT1O14929 419 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 NBNO60934 754 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 CRYZL1O95825 349 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 EIF2S1P05198 315 aaKnown RBP14.05□□□□□ -0.16
SDC1-201ENST00000254351 AKT1P31749 480 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 CTSKP43235 329 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 HSPA7P48741 367 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 SCNN1GP51170 649 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 ZXDBP98169 803 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 SLC14A1Q13336 389 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 DCAF4L1Q3SXM0 396 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 COQ5Q5HYK3 327 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 CPZQ66K79 652 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 ERAP2Q6P179 960 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 SCN4BQ8IWT1 228 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 MSRB3Q8IXL7 192 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 SVOPLQ8N434 492 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 GTF2H4Q92759 462 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 TSGA13Q96PP4 275 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 NFKBIZQ9BYH8 718 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 BRINP2Q9C0B6 783 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 OR2B2Q9GZK3 357 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 DUSP21Q9H596 190 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 CATSPERBQ9H7T0 1116 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 RAD18Q9NS91 495 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 SIRT5Q9NXA8 310 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 GABRQQ9UN88 632 aa14.05□□□□□ -0.16
SDC1-201ENST00000254351 PNMA8CA0A1B0GUJ8 204 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms