RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 SYT12Q8IV01 421 aa15.57■□□□□ 0.08
SLC6A8-201ENST00000253122 TRIM48Q8IWZ4 208 aa15.57■□□□□ 0.08
SLC6A8-201ENST00000253122 PHF21AQ96BD5 680 aa15.57■□□□□ 0.08
SLC6A8-201ENST00000253122 AMBRA1Q9C0C7 1298 aa15.57■□□□□ 0.08
SLC6A8-201ENST00000253122 PAQR5Q9NXK6 330 aaPredicted RBP15.57■□□□□ 0.08
SLC6A8-201ENST00000253122 A0A1B0GTL3 188 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 SYNDIG1LA6NDD5 238 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 HPRP00739 348 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 VIPP01282 170 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 LPOP22079 712 aaPredicted RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 TUFMP49411 452 aaKnown RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 SELENBP1Q13228 472 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 C18orf21Q32NC0 220 aaPredicted RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 SPATS1Q496A3 300 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 ARRDC4Q8NCT1 418 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 VPS37AQ8NEZ2 397 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 PYURFQ96I23 114 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 DOK1Q99704 481 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 ARL15Q9NXU5 204 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 MARCH2Q9P0N8 246 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 UTS2RQ9UKP6 389 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 HS3ST4Q9Y661 456 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 LCHNA4D1U4 455 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 TREHO43280 583 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 COX7A2P14406 83 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 HNRNPFP52597 415 aaKnown RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 STC1P52823 247 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 GP2P55259 537 aaKnown RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 C19orf18Q8NEA5 215 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 CNDP2Q96KP4 475 aaKnown RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 CDK5RAP1Q96SZ6 601 aaKnown RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 CNPPD1Q9BV87 410 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 TRIT1Q9H3H1 467 aaKnown RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 ATP13A1Q9HD20 1204 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 ABCB9Q9NP78 766 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 PARP14Q460N5 1801 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 I6L893 689 aaPredicted RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 OR1I1O60431 355 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 NDST3O95803 873 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 PFKLP17858 780 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 GADD45AP24522 165 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 BEX3Q00994 111 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 XAF1Q6GPH4 301 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 RBM23Q86U06 439 aaKnown RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 TRIM69Q86WT6 500 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 FAM83FQ8NEG4 500 aaPredicted RBP15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 ABHD16BQ9H3Z7 469 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 PTPRFP10586 1907 aa15.56■□□□□ 0.08
SLC6A8-201ENST00000253122 LZTS3O60299 673 aaPredicted RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 CPNE3O75131 537 aaKnown RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 GUCY1B2O75343 617 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 CTPS1P17812 591 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 STEAP3Q658P3 488 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 KLHL17Q6TDP4 642 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 PAQR9Q6ZVX9 377 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 BEND5Q7L4P6 421 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 WDR36Q8NI36 951 aaKnown RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 SLC38A4Q969I6 547 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 ADGRE3Q9BY15 652 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 NSUN3Q9H649 340 aaKnown RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 TLR8Q9NR97 1041 aaKnown RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 UBA2Q9UBT2 640 aaPredicted RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 CSF2P04141 144 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 FDXRP22570 491 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 SOAT1P35610 550 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 ACVRL1P37023 503 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 OR1G1P47890 313 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 AAK1Q2M2I8 961 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 PPP2R2DQ66LE6 453 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 FAM131AQ6UXB0 335 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 ARHGAP12Q8IWW6 846 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 TINF2Q9BSI4 451 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 TIGARQ9NQ88 270 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 WDR90Q96KV7 1748 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 A0A1W2PQ67 120 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 ISPDA4D126 451 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 SLC28A1O00337 649 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 DNAJB5O75953 348 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 SMARCB1Q12824 385 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 TBRG1Q3YBR2 411 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 TIGD5Q53EQ6 642 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 ALFQ53S48 1182 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 TMPRSS11AQ6ZMR5 421 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 ZNF517Q6ZMY9 492 aaPredicted RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 OR7D4Q8NG98 312 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 UBE2FQ969M7 185 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 IMP4Q96G21 291 aaKnown RBP15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 PHOX2BQ99453 314 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 DERL2Q9GZP9 239 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 SNTG1Q9NSN8 517 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 STMN3Q9NZ72 180 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 SPASTQ9UBP0 616 aa15.55■□□□□ 0.08
SLC6A8-201ENST00000253122 GNG14A0A1W2PPG7 69 aa15.54■□□□□ 0.08
SLC6A8-201ENST00000253122 H3BN98 237 aa15.54■□□□□ 0.08
SLC6A8-201ENST00000253122 ZNF7P17097 686 aaPredicted RBP15.54■□□□□ 0.08
SLC6A8-201ENST00000253122 PPP3CCP48454 512 aa15.54■□□□□ 0.08
SLC6A8-201ENST00000253122 ERVPABLB-1P60509 514 aa15.54■□□□□ 0.08
SLC6A8-201ENST00000253122 FAM189BP81408 668 aa15.54■□□□□ 0.08
SLC6A8-201ENST00000253122 MVKQ03426 396 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms