RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 THAP5Q7Z6K1 395 aa20.83■□□□□ 0.92
TRIM28-201ENST00000253024 APIPQ96GX9 242 aa20.83■□□□□ 0.92
TRIM28-201ENST00000253024 A0A0C4DFX4 3053 aa20.83■□□□□ 0.92
TRIM28-201ENST00000253024 WDR47O94967 919 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 SELPP16109 830 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 CYP27C1Q4G0S4 372 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 PERM1Q5SV97 790 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 ANGPTL8Q6UXH0 198 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 FNDC8Q8TC99 324 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 MBOAT4Q96T53 435 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 AMBNQ9NP70 447 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 PTBP2Q9UKA9 531 aaKnown RBP20.82■□□□□ 0.92
TRIM28-201ENST00000253024 SCN4AP35499 1836 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 OR2AG2A6NM03 316 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 IFRD1O00458 451 aaPredicted RBP20.82■□□□□ 0.92
TRIM28-201ENST00000253024 MANBAO00462 879 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 CCNA2P20248 432 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 PLA2G16P53816 162 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 NFATC3Q12968 1075 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 DGKKQ5KSL6 1271 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 RBFAQ8N0V3 343 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 SCAMP4Q969E2 229 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 ACDQ96AP0 544 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 MTG2Q9H4K7 406 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 ELOVL6Q9H5J4 265 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 STK16O75716 305 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 ABCB1P08183 1280 aaPredicted RBP20.82■□□□□ 0.92
TRIM28-201ENST00000253024 HALP42357 657 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 HLCSP50747 726 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 DGKEP52429 567 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 C21orf59P57076 290 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 SPCS2Q15005 226 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 COQ5Q5HYK3 327 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 FAM180BQ6P0A1 224 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 BBS7Q8IWZ6 715 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 CMTM8Q8IZV2 173 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 OR7A2PQ8NGA2 310 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 ZDHHC6Q9H6R6 413 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 CD320Q9NPF0 282 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 GNPTGQ9UJJ9 305 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 PNMA8BQ9ULN7 279 aaPredicted RBP20.82■□□□□ 0.92
TRIM28-201ENST00000253024 CCL27Q9Y4X3 112 aa20.82■□□□□ 0.92
TRIM28-201ENST00000253024 H7C4K7 107 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 TBC1D4O60343 1298 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 CREG1O75629 220 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 GBAP04062 536 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 UMPSP11172 480 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 PHEXP78562 749 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 PCBP2Q15366 365 aaKnown RBP eCLIP20.81■□□□□ 0.926e-9■■■■□ 22.7
TRIM28-201ENST00000253024 LRRC66Q68CR7 880 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 XAF1Q6GPH4 301 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 ZCCHC8Q6NZY4 707 aaKnown RBP20.81■□□□□ 0.92
TRIM28-201ENST00000253024 ZNF366Q8N895 744 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 ZNF555Q8NEP9 628 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 PPP3R2Q96LZ3 170 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 C1QTNF3Q9BXJ4 246 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 EPS8L2Q9H6S3 715 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 PLGRKTQ9HBL7 147 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 PAK1IP1Q9NWT1 392 aaPredicted RBP20.81■□□□□ 0.92
TRIM28-201ENST00000253024 ABCG2Q9UNQ0 655 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 TNPO3Q9Y5L0 923 aaKnown RBP20.81■□□□□ 0.92
TRIM28-201ENST00000253024 PER2O15055 1255 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 UGT2B4P06133 528 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 HTR1AP08908 422 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 DGKAP23743 735 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 ZNF621Q6ZSS3 439 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 NECAB2Q7Z6G3 386 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 TPD52L3Q96J77 140 aa20.81■□□□□ 0.92
TRIM28-201ENST00000253024 TYW5A2RUC4 315 aaKnown RBP20.8■□□□□ 0.92
TRIM28-201ENST00000253024 K7EPI3 171 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 FKBP9O95302 570 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 BCL10O95999 233 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 CRHBPP24387 322 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 CCR7P32248 378 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 TUFMP49411 452 aaKnown RBP20.8■□□□□ 0.92
TRIM28-201ENST00000253024 CLCN4P51793 760 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 RAPSNQ13702 412 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 KIAA0040Q15053 153 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 BROXQ5VW32 411 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 Q6ZPB1 254 aaPredicted RBP20.8■□□□□ 0.92
TRIM28-201ENST00000253024 FKBP9P1Q75LS8 142 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 ZNF551Q7Z340 670 aaPredicted RBP20.8■□□□□ 0.92
TRIM28-201ENST00000253024 NPAS4Q8IUM7 802 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 SPARTQ8N0X7 666 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 KLF16Q9BXK1 252 aaPredicted RBP20.8■□□□□ 0.92
TRIM28-201ENST00000253024 S100A3P33764 101 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 OCA2Q04671 838 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 CD300CQ08708 224 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 PTCHD3Q3KNS1 767 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 USP51Q70EK9 711 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 UBE2R2Q712K3 238 aaPredicted RBP20.8■□□□□ 0.92
TRIM28-201ENST00000253024 CEP68Q76N32 757 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 CLECL1Q8IZS7 167 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 PPT2Q9UMR5 302 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 ST14Q9Y5Y6 855 aa20.8■□□□□ 0.92
TRIM28-201ENST00000253024 TRBC1P01850 177 aa20.79■□□□□ 0.92
TRIM28-201ENST00000253024 TNFRSF1BP20333 461 aa20.79■□□□□ 0.92
TRIM28-201ENST00000253024 ACRV1P26436 265 aa20.79■□□□□ 0.92
TRIM28-201ENST00000253024 SREBF2Q12772 1141 aa20.79■□□□□ 0.92
TRIM28-201ENST00000253024 AQP6Q13520 282 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms