RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 K7EPI3 171 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 DDX6P26196 483 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEK4-201ENST00000233027 PPM1AP35813 382 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 GJA8P48165 433 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 CAMK1Q14012 370 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 IQCCQ4KMZ1 466 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 CCDC36Q8IYA8 594 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 OR4C6Q8NH72 309 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 SUN5Q8TC36 379 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 TWNKQ96RR1 684 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 TMEM209Q96SK2 561 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 TTYH1Q9H313 450 aaPredicted RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 GPN3Q9UHW5 284 aaPredicted RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 COLEC10Q9Y6Z7 277 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 HCRTO43612 131 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 PCDH7O60245 1069 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ENGP17813 658 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 PCBP2Q15366 365 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEK4-201ENST00000233027 TMEM203Q969S6 136 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 SIPA1Q96FS4 1042 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 FCRL5Q96RD9 977 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ZNF347Q96SE7 839 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 KCNN2Q9H2S1 579 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 FKBP7Q9Y680 259 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 POP4O95707 220 aaKnown RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 GNRH1P01148 92 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 APODP05090 189 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ITGB1P05556 798 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 SNX20Q7Z614 316 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 RASSF5Q8WWW0 418 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 STON2Q8WXE9 905 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 KLK6Q92876 244 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 DEFB118Q96PH6 123 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 PIGVQ9NUD9 493 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 FZD4Q9ULV1 537 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 RUVBL1Q9Y265 456 aaKnown RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 A0A1W2PQ72 361 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 J3QRK9 145 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 TPD52L2O43399 206 aaKnown RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 SELPP16109 830 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 NSG1P42857 185 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 NCBP2P52298 156 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEK4-201ENST00000233027 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 UFM1P61960 85 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 PRR5P85299 388 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 HERC3Q15034 1050 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ULK3Q6PHR2 472 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 PDSS2Q86YH6 399 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 HID1Q8IV36 788 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 GLB1L3Q8NCI6 653 aaPredicted RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 PLD4Q96BZ4 506 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 FBXL8Q96CD0 374 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 HSPBAP1Q96EW2 488 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ABCB8Q9NUT2 735 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 TAS2R7Q9NYW3 318 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 SEPT4O43236 478 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ORC5O43913 435 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ARHGDIBP52566 201 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 AP1S1P61966 158 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
NEK4-201ENST00000233027 ADGRG6Q86SQ4 1221 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 OR9I1Q8NGQ6 314 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 CCDC115Q96NT0 180 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 IL4I1Q96RQ9 567 aa13.12□□□□□ -0.31
NEK4-201ENST00000233027 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 PPEF2O14830 753 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 DCLK1O15075 740 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 DLX3O60479 287 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 PRKD3O94806 890 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 MAT2AP31153 395 aaKnown RBP13.11□□□□□ -0.31
NEK4-201ENST00000233027 TIE1P35590 1138 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 KHKP50053 298 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 INHBEP58166 350 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 TIGD5Q53EQ6 642 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 RBM20Q5T481 1227 aaKnown RBP13.11□□□□□ -0.31
NEK4-201ENST00000233027 OR4F3Q6IEY1 312 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 CCSAPQ6IQ19 270 aaPredicted RBP13.11□□□□□ -0.31
NEK4-201ENST00000233027 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 KLHL35Q6PF15 583 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 ASB18Q6ZVZ8 466 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 KCT2Q8NC54 265 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 GAL3ST4Q96RP7 486 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 TMEM59LQ9UK28 342 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 PHF24Q9UPV7 400 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 J3KR12 359 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 TGFB1P01137 390 aa13.11□□□□□ -0.31
NEK4-201ENST00000233027 IL7RP16871 459 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms