RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PCDHB1Q9Y5F3 818 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 FAM240BA0A1B0GVZ2 78 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 CASKO14936 926 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 SLC28A2O43868 658 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 APOL3O95236 402 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 TGFB1P01137 390 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 CSF2P04141 144 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 ALOX5P09917 674 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 DPP6P42658 865 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 FPGSQ05932 587 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.26
NFKB1-201ENST00000226574 RFTN1Q14699 578 aaPredicted RBP13.46□□□□□ -0.26
NFKB1-201ENST00000226574 RFTN2Q52LD8 501 aaPredicted RBP13.46□□□□□ -0.26
NFKB1-201ENST00000226574 OR2T5Q6IEZ7 315 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 FUT10Q6P4F1 479 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 BLOC1S3Q6QNY0 202 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 TRIM48Q8IWZ4 208 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 OR2T29Q8NH02 315 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 RELTQ969Z4 430 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 EXOSC8Q96B26 276 aaKnown RBP13.46□□□□□ -0.26
NFKB1-201ENST00000226574 WRAP53Q9BUR4 548 aaKnown RBP13.46□□□□□ -0.26
NFKB1-201ENST00000226574 BEX2Q9BXY8 128 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 MUC13Q9H3R2 512 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 TRPV5Q9NQA5 729 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 ZDHHC7Q9NXF8 308 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 AHSPQ9NZD4 102 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 SATB2Q9UPW6 733 aa13.46□□□□□ -0.26
NFKB1-201ENST00000226574 SOX14O95416 240 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PSMA1P25786 263 aaKnown RBP13.45□□□□□ -0.26
NFKB1-201ENST00000226574 RAB14P61106 215 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 ABRAXAS2Q15018 415 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 TRIM40Q6P9F5 258 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 GHDCQ8N2G8 530 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 OR4K1Q8NGD4 311 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 ITFG2Q969R8 447 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 SMOC2Q9H3U7 446 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 FAM124BQ9H5Z6 455 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-201ENST00000226574 IGSF5Q9NSI5 407 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 CRNNQ9UBG3 495 aaPredicted RBP13.45□□□□□ -0.26
NFKB1-201ENST00000226574 CEPT1Q9Y6K0 416 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 A8MU76 341 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 NEDD8-MDP1E9PL57 170 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 VIPP01282 170 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 STATHP02808 62 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PCBP2Q15366 365 aaKnown RBP eCLIP13.45□□□□□ -0.264e-6■■■□□ 18.9
NFKB1-201ENST00000226574 TAZQ16635 292 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PTCHD3Q3KNS1 767 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PIK3R6Q5UE93 754 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 FAM91A1Q658Y4 838 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 FAM180BQ6P0A1 224 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 C3orf58Q8NDZ4 430 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 IMP4Q96G21 291 aaKnown RBP13.45□□□□□ -0.26
NFKB1-201ENST00000226574 LHPPQ9H008 270 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 GSTK1Q9Y2Q3 226 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 AP3M1Q9Y2T2 418 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 UBR2Q8IWV8 1755 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 H0YC42 278 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 H3BMQ9 156 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 M0QX08 132 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 HAS3O00219 553 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 BMP10O95393 424 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 HSPB3Q12988 150 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PDCD4Q53EL6 469 aaKnown RBP13.45□□□□□ -0.26
NFKB1-201ENST00000226574 HMGN2P46Q86SG4 172 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 CFAP206Q8IYR0 622 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 RGL4Q8IZJ4 473 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 ZUFSPQ96AP4 578 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 COG8Q96MW5 612 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 TVP23BQ9NYZ1 205 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PTBP2Q9UKA9 531 aaKnown RBP13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 CPQQ9Y646 472 aa13.45□□□□□ -0.26
NFKB1-201ENST00000226574 PRSS51A0A1B0GVH4 220 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 ALDOCP09972 364 aaKnown RBP13.44□□□□□ -0.26
NFKB1-201ENST00000226574 NR2F6P10588 404 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-201ENST00000226574 SPAM1P38567 509 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 KCNC1P48547 511 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 ATP12AP54707 1039 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 COX10Q12887 443 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 HSF5Q4G112 596 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-201ENST00000226574 TMPRSS11AQ6ZMR5 421 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 FGD2Q7Z6J4 655 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 VTCN1Q7Z7D3 282 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 HJURPQ8NCD3 748 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-201ENST00000226574 ASZ1Q8WWH4 475 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 UROC1Q96N76 676 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 ADAMTS10Q9H324 1103 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 C8orf4Q9NR00 106 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 C14orf119Q9NWQ9 140 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 ZIM2Q9NZV7 527 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 SEC14L3Q9UDX4 400 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 ZNF221Q9UK13 617 aa13.44□□□□□ -0.26
NFKB1-201ENST00000226574 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
NFKB1-201ENST00000226574 F2P00734 622 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms