RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PTPN3P26045 913 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 HTR1EP28566 365 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 CBX5P45973 191 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 ERVFC1P60507 584 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 CBX2Q14781 532 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-201ENST00000216877 WSCD2Q2TBF2 565 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 CRY2Q49AN0 593 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF57Q68EA5 555 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-201ENST00000216877 LAIR1Q6GTX8 287 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 PPHLN1Q8NEY8 458 aaKnown RBP14.36□□□□□ -0.11
PTPRA-201ENST00000216877 ZMIZ2Q8NF64 920 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 MRPL4Q9BYD3 311 aaKnown RBP14.36□□□□□ -0.11
PTPRA-201ENST00000216877 MUC13Q9H3R2 512 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF490Q9ULM2 529 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SAMHD1Q9Y3Z3 626 aaKnown RBP14.36□□□□□ -0.11
PTPRA-201ENST00000216877 PCDHB5Q9Y5E4 795 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 TARM1B6A8C7 271 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 PRSS23O95084 383 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 ICAM3P32942 547 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 NRIP1P48552 1158 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SCNN1GP51170 649 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 DGKEP52429 567 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 CLDN10P78369 228 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 CREMQ03060 361 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 MAB21L1Q13394 359 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SGO1Q5FBB7 561 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 BBS7Q8IWZ6 715 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 VWA5B2Q8N398 1253 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SVOPLQ8N434 492 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 TTLQ8NG68 377 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 RNF34Q969K3 372 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 RNF170Q96K19 258 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 GSTO2Q9H4Y5 243 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF451Q9Y4E5 1061 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 WBP4O75554 376 aaKnown RBP14.36□□□□□ -0.11
PTPRA-201ENST00000216877 LYPLA2O95372 231 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 CRISP3P54108 245 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 C2orf80Q0P641 193 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 AAK1Q2M2I8 961 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 GNASQ5JWF2 1037 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 C6orf132Q5T0Z8 1188 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 ANKRD54Q6NXT1 300 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 BHLHB9Q6PI77 547 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 TMEM65Q6PI78 240 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 BRAT1Q6PJG6 821 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 KCNC2Q96PR1 638 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 TTLL2Q9BWV7 592 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SMURF1Q9HCE7 757 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 GPR83Q9NYM4 423 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 A0A087X1B8 175 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 OR2A25A4D2G3 310 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 CLDN24A6NM45 220 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 HACD1B0YJ81 288 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 MDM4O15151 490 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 NFICP08651 508 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TXNP10599 105 aaKnown RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ERVK-8P63133 956 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ELP6Q0PNE2 266 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 C8orf82Q6P1X6 216 aaPredicted RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 RASSF6Q6ZTQ3 369 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ANKS3Q6ZW76 656 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 PDZD4Q76G19 769 aaPredicted RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 GMCL1P1Q8NEA9 526 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 OR8K3Q8NH51 312 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TOE1Q96GM8 510 aaKnown RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TMEM80Q96HE8 168 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 HPDLQ96IR7 371 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ZDHHC15Q96MV8 337 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 USB1Q9BQ65 265 aaKnown RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 KATNAL1Q9BW62 490 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 DUSP21Q9H596 190 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 FAM198AQ9UFP1 575 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TSPAN3O60637 253 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 HPRP00739 348 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TGFBR2P37173 567 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 HUNKP57058 714 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 GPR85P60893 370 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 B2MP61769 119 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 RFX4Q33E94 735 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TECRLQ5HYJ1 363 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 NOMO2Q5JPE7 1267 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 IRAK1BP1Q5VVH5 260 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 LIPIQ6XZB0 460 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TMEM192Q8IY95 271 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 BCL7CQ8WUZ0 217 aaPredicted RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TTC9Q92623 222 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 RDH12Q96NR8 316 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 NT5C1AQ9BXI3 368 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 CATSPERZQ9NTU4 200 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 SPATA6Q9NWH7 488 aaPredicted RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 IMPAD1Q9NX62 359 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 MIOSQ9NXC5 875 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 B3GNT2Q9NY97 397 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ALG5Q9Y673 324 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 YDJCA8MPS7 323 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms