RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Nusap1Q9ERH4 427 aaKnown RBP8.89□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Htr3bQ9JHJ5 437 aa8.89□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Mpp6Q9JLB0 553 aa8.89□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SigirrQ9JLZ8 409 aa8.89□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Hipk2Q9QZR5 1196 aa8.89□□□□□ -0.99
Upf3b-201ENSMUST00000076265 B9d1Q9R1S0 204 aa8.89□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ankrd63A2ARS0 390 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Dennd3A2RT67 1274 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Arxes1C0HK79 180 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Arxes2C0HK80 180 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Srp54bE9PXC0 504 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Inpp5aE9QAS7 422 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zfp989H3BLB0 661 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Itgb5O70309 798 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Srp54P14576 504 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gabrb1P50571 474 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SnnP61807 88 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Myo1fP70248 1099 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Itgb8Q0VBD0 767 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cd163Q2VLH6 1121 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Znf865Q3U3I9 1058 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Wdr75Q3U821 830 aaKnown RBP8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm10662Q3UT86 313 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 P3h1Q3V1T4 739 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cyp7a1Q64505 503 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Znf532Q6NXK2 1036 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ceacam9Q78T27 234 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olfr392Q7TRX6 312 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 BspryQ80YW5 473 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ints6lQ8BND4 861 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Nsl1Q8K305 281 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Vmn1r208Q8R275 308 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Top1mtQ8R4U6 593 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tmem5Q8VDX6 444 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SardhQ99LB7 919 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 P2ry12Q9CPV9 347 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Q9CPZ3 230 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Toe1Q9D2E2 511 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olig2Q9EQW6 323 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Nit2Q9JHW2 276 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Adrm1Q9JKV1 407 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 CasrQ9QY96 1079 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gpc1Q9QZF2 557 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Kcne4Q9WTW3 170 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ankrd31A0A140LI88 1765 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm28710A0A1B0GR31 962 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Adh6bA0A1D5RMB0 384 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Dcaf10A2AKB9 566 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Skint3A7TZF0 458 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Prrt2E9PUL5 346 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Foxn2E9Q7L6 429 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rarres1F6ZIS7 283 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Prps1l3G3UXL2 318 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ogg1O08760 345 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Fkbp8O35465 402 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Mmp15O54732 657 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Itgb3O54890 787 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 ArafP04627 604 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tcea1P10711 301 aaKnown RBP8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rrm2P11157 390 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cyp2d9P11714 504 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 PhexP70669 749 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cd96Q3U0X8 602 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Psg28Q4KL66 472 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cfhr2Q4LDF6 332 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Kctd19Q562E2 927 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Taar8aQ5QD07 344 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Meis1Q60954 390 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Bdkrb1Q61125 334 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Arnt2Q61324 712 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Nudt16Q6P3D0 195 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Onecut2Q6XBJ3 505 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cpeb4Q7TN98 729 aaKnown RBP8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Dmrt3Q80WT2 476 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 U2af1l4Q8BGJ9 220 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Abi3Q8BYZ1 367 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tmem154Q8C4Q9 181 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Prps1l1Q8C5R8 318 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 FggQ8VCM7 436 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Chrm5Q920H4 532 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Akirin1Q99LF1 191 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 CalcbQ99MP3 130 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Katnal2Q9D3R6 539 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Prps1Q9D7G0 318 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 FcrlsQ9EQY5 509 aa8.88□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Myh1Q5SX40 1942 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm13040A2A8C4 496 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Pusl1A2ADA5 291 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ccnyl1D3YUJ3 367 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm21411J3KMS0 136 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rundc3aO08576 446 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 NgpO08692 167 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 CaluO35887 315 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gtf2h4O70422 463 aaKnown RBP8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Adam15O88839 864 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ifna9P09235 190 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Pet117P0DJF2 80 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Msh3P13705 1091 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 CblP22682 913 aa8.87□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tnfsf8P32972 239 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms