RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 DCUN1D3Q8IWE4 304 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 TRIM48Q8IWZ4 208 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 EID2Q8N6I1 236 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 OR5AR1Q8NGP9 310 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 OR9A1PQ8NGU1 263 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 SLC37A2Q8TED4 501 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 PATE1Q8WXA2 126 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 SCYL1Q96KG9 808 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 APOLD1Q96LR9 279 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 CCDC138Q96M89 665 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 CAMK1GQ96NX5 476 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 ATOH8Q96SQ7 321 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 UNKQ9C0B0 810 aaKnown RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 MRPL46Q9H2W6 279 aaKnown RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 STN1Q9H668 368 aaKnown RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 ALG9Q9H6U8 611 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 KIR3DX1Q9H7L2 352 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 UCK1Q9HA47 277 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 RXFP3Q9NSD7 469 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 IMP3Q9NV31 184 aaKnown RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 NCKIPSDQ9NZQ3 722 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 SIRPGQ9P1W8 387 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 PLLPQ9Y342 182 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 OARD1Q9Y530 152 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 PABPN1LA6NDY0 278 aaKnown RBP11.98□□□□□ -0.49
LINC00339-213ENST00000642137 NPEPPSL1A6NEC2 478 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 SYCE1LA8MT33 242 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 ARHGEF33A8MVX0 844 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 TARM1B6A8C7 271 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 PPM1DO15297 605 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00339-213ENST00000642137 SIGLEC6O43699 453 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 KERAO60938 352 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 SPAG7O75391 227 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 TOP3BO95985 862 aaKnown RBP11.98□□□□□ -0.49
LINC00339-213ENST00000642137 CD59P13987 128 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 PNLIPP16233 465 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 HSD17B2P37059 387 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 GRK6P43250 576 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 GLRBP48167 497 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 DUSP3P51452 185 aaPredicted RBP11.98□□□□□ -0.49
LINC00339-213ENST00000642137 AP1S2P56377 157 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 HHEXQ03014 270 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 GRB7Q14451 532 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 TGFBIQ15582 683 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 PPP1R3AQ16821 1122 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 HSP90B2PQ58FF3 399 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 C16orf46Q6P387 395 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 TMEM26Q6ZUK4 368 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 GPSM1Q86YR5 675 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 SFTPA2Q8IWL1 248 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 SLC35F3Q8IY50 421 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 TCP10LQ8TDR4 215 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 RHBDD1Q8TEB9 315 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 IQCGQ9H095 443 aaKnown RBP11.98□□□□□ -0.49
LINC00339-213ENST00000642137 MED4Q9NPJ6 270 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 RNF112Q9ULX5 631 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 TMCO1Q9UM00 188 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 PADI4Q9UM07 663 aa11.98□□□□□ -0.49
LINC00339-213ENST00000642137 PRAMEF33A0A0G2JMD5 474 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 EME2A4GXA9 379 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-213ENST00000642137 C4orf47A7E2U8 309 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 MYO1CO00159 1063 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 TM9SF1O15321 606 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 NUDT21O43809 227 aaKnown RBP11.97□□□□□ -0.49
LINC00339-213ENST00000642137 PLIN3O60664 434 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 ANXA5P08758 320 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 SBK3P0C264 359 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 TPBGLP0DKB5 382 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 GLB1P16278 677 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 BDKRB1P46663 353 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 LIMK1P53667 647 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
LINC00339-213ENST00000642137 PRKG2Q13237 762 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 BIRC2Q13490 618 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 ARHGAP19Q14CB8 494 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 NR0B2Q15466 257 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 PHKG1Q16816 387 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 PROX2Q3B8N5 592 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 CCSMST1Q4G0I0 132 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.97□□□□□ -0.49
LINC00339-213ENST00000642137 DUS1LQ6P1R4 473 aaKnown RBP11.97□□□□□ -0.49
LINC00339-213ENST00000642137 FRA10AC1Q70Z53 315 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 RAB42Q8N4Z0 105 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 KYQ8NBH2 561 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 OR52E1Q8NGJ3 308 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 PKP4Q99569 1192 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 KCNK9Q9NPC2 374 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 EVA1BQ9NVM1 165 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 NUDT4Q9NZJ9 180 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 SPATA7Q9P0W8 599 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 LRIT1Q9P2V4 623 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 LNPEPQ9UIQ6 1025 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 MID2Q9UJV3 735 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 EMCNQ9ULC0 261 aa11.97□□□□□ -0.49
LINC00339-213ENST00000642137 TDRKHQ9Y2W6 561 aaKnown RBP11.97□□□□□ -0.49
LINC00339-213ENST00000642137 PCM1Q15154 2024 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms