RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 LRRC70Q7Z2Q7 622 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 GALNT13Q8IUC8 556 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 TCAIMQ8N3R3 496 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 CYB5D2Q8WUJ1 264 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SORCS1Q8WY21 1168 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 MRGPRX3Q96LB0 322 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 DPY30Q9C005 99 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 EPB41L1Q9H4G0 881 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 FAM83DQ9H4H8 585 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 C1orf109Q9NX04 203 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 CXXC1Q9P0U4 656 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 WNT6Q9Y6F9 365 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 PDYNP01213 254 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 KRT6AP02538 564 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 KRT6BP04259 564 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 KRT6CP48668 564 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 POLE2P56282 527 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 NTHL1P78549 312 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 APOFQ13790 326 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 ATP6AP1Q15904 470 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 FAM174BQ3ZCQ3 159 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 ARSIQ5FYB1 569 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 GLYATQ6IB77 296 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 HOMEZQ8IX15 550 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 MFSD2AQ8NA29 543 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 GTF2H4Q92759 462 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 ZSWIM3Q96MP5 696 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 ACPTQ9BZG2 426 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 VAPAQ9P0L0 249 aa16.67■□□□□ 0.26
PHGDH-211ENST00000641213 SMIM31A0A1B0GVY4 71 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 GFYI3L273 518 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 PLOD2O00469 737 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 DLGAP1O14490 977 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 ARHGEF15O94989 841 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 FGBP02675 491 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 HIST1H2AGP0C0S8 130 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-211ENST00000641213 HIST1H2ADP20671 130 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 SLC6A12P48065 614 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 USP39Q53GS9 565 aaKnown RBP16.66■□□□□ 0.26
PHGDH-211ENST00000641213 Q6ZVL8 140 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 TBC1D21Q8IYX1 336 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 KRTCAP2Q8N6L1 136 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 GLB1L3Q8NCI6 653 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-211ENST00000641213 OR8J3Q8NGG0 315 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 POF1BQ8WVV4 589 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 TFAP2CQ92754 450 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 HIST1H2AHQ96KK5 128 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 HIST1H2AJQ99878 128 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 H2AFJQ9BTM1 129 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 C9orf16Q9BUW7 83 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 ANKRD60Q9BZ19 345 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 CLMPQ9H6B4 373 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 PCDH12Q9NPG4 1184 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 PAPOLBQ9NRJ5 636 aaKnown RBP16.66■□□□□ 0.26
PHGDH-211ENST00000641213 MAGEL2Q9UJ55 1249 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 OAZ3Q9UMX2 235 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 NUP210Q8TEM1 1887 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-211ENST00000641213 KCNE1BA0A087WTH5 132 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 ACOX3O15254 700 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 SGTAO43765 313 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 DFNA5O60443 496 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 OR6B1O95007 311 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 IL6P05231 212 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 CTSLP07711 333 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 BCKDHAP12694 445 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 ATP6V1B1P15313 513 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 TIMP2P16035 220 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 GSTT1P30711 240 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 CTNNB1P35222 781 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 BMPR1AP36894 532 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 ETV3P41162 512 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 HNMTP50135 292 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 DCDC1P59894 354 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 PLOD1Q02809 727 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-211ENST00000641213 SP140Q13342 867 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 MAPKAPK3Q16644 382 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 PTCHD3Q3KNS1 767 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 GGTA1PQ4G0N0 100 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 SLC44A4Q53GD3 710 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 SPANXN4Q5MJ08 99 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 SPRED1Q7Z699 444 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 DTWD1Q8N5C7 304 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 METTL25Q8N6Q8 603 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 ZNF583Q96ND8 569 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 SEPHS2Q99611 448 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 P2RY13Q9BPV8 354 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 MTG2Q9H4K7 406 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 NDUFA13Q9P0J0 144 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 PADI4Q9UM07 663 aa16.66■□□□□ 0.26
PHGDH-211ENST00000641213 TSPAN11A1L157 253 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 UPK3BL1B0FP48 263 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 UPK3BL2E5RIL1 263 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 KPNA5O15131 536 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 SLC16A5O15375 505 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 PGRP06401 933 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 PRSS36Q5K4E3 855 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 NEK5Q6P3R8 708 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 RTL10Q7L3V2 364 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 SPPL3Q8TCT6 385 aa16.65■□□□□ 0.26
PHGDH-211ENST00000641213 ELMO1Q92556 727 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms