RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 ADAMTSL2Q86TH1 951 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 ZNF761Q86XN6 746 aaPredicted RBP21■□□□□ 0.95
TSPAN9-208ENST00000640568 BAHD1Q8TBE0 780 aaPredicted RBP21■□□□□ 0.95
TSPAN9-208ENST00000640568 IFI44Q8TCB0 444 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 CCDC74AQ96AQ1 378 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 NXNL1Q96CM4 212 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 HIST1H2AHQ96KK5 128 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 HIST1H2AJQ99878 128 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 H2AFJQ9BTM1 129 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 VIPAS39Q9H9C1 493 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 U3KQA8 63 aa21■□□□□ 0.95
TSPAN9-208ENST00000640568 GFYI3L273 518 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 TNFSF14O43557 240 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 CBFA2T3O75081 653 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 KLHL2O95198 593 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 COL6A2P12110 1019 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 PLA2G5P39877 138 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 KPNA2P52292 529 aaKnown RBP20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 TSNAXIP1Q2TAA8 658 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 PIP4P1Q86T03 277 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 ALYREFQ86V81 257 aaKnown RBP20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 DEFB124Q8NES8 71 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 OR52E1Q8NGJ3 308 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 MCOLN3Q8TDD5 553 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 ZMYND15Q9H091 742 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 STMN4Q9H169 189 aaPredicted RBP20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 UCK1Q9HA47 277 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 ADAMTS6Q9UKP5 1117 aa20.99■□□□□ 0.95
TSPAN9-208ENST00000640568 ARHGEF33A8MVX0 844 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 CDC7O00311 574 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 ENO2P09104 434 aaPredicted RBP20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 PNLIPP16233 465 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 TFEBP19484 476 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 ACP1P24666 158 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 ALDH4A1P30038 563 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 TSNQ15631 228 aaKnown RBP20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 SRRM1Q8IYB3 904 aaKnown RBP20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 CENPLQ8N0S6 344 aaPredicted RBP20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 AHCYL2Q96HN2 611 aaKnown RBP20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 SCYL1Q96KG9 808 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 SLC12A9Q9BXP2 914 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 ACBD3Q9H3P7 528 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 PARVBQ9HBI1 364 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 IGSF5Q9NSI5 407 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 KCNK4Q9NYG8 393 aa20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 PTPRZ1P23471 2315 aaPredicted RBP20.98■□□□□ 0.95
TSPAN9-208ENST00000640568 RP1P56715 2156 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 LILRA5A6NI73 299 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 SLC30A4O14863 429 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 KRT4P19013 534 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 GPR3P46089 330 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 GLRBP48167 497 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 DLG1Q12959 904 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 ACAP2Q15057 778 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 TRABD2AQ86V40 505 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 GOLGA6L1Q8N7Z2 621 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 Q8N9G6 341 aaPredicted RBP20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 FBXO15Q8NCQ5 510 aaPredicted RBP20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 LCN9Q8WX39 176 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 JPH3Q8WXH2 748 aaPredicted RBP20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 CCDC3Q9BQI4 270 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 RAB11FIP5Q9BXF6 653 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 TBC1D10AQ9BXI6 508 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 TFB2MQ9H5Q4 396 aaKnown RBP20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 ALG9Q9H6U8 611 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 SENP1Q9P0U3 644 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 CIDEBQ9UHD4 219 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 RNF112Q9ULX5 631 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 PLAGL1Q9UM63 463 aa20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 NOVA2Q9UNW9 492 aaKnown RBP20.97■□□□□ 0.95
TSPAN9-208ENST00000640568 FOXO6A8MYZ6 492 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 AMD1P17707 334 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 SDHBP21912 280 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 TRIP6Q15654 476 aaKnown RBP20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 PERM1Q5SV97 790 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 ZNF438Q7Z4V0 828 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 LCA5Q86VQ0 697 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 C4orf33Q8N1A6 199 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 PLD6Q8N2A8 252 aaKnown RBP20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 OR9A1PQ8NGU1 263 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 STAG3L4Q8TBR4 150 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 KIAA1191Q96A73 305 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 SMC6Q96SB8 1091 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 SRMSQ9H3Y6 488 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 SYNDIG1Q9H7V2 258 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 LNPEPQ9UIQ6 1025 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 IKZF3Q9UKT9 509 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 PDE10AQ9Y233 779 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 OARD1Q9Y530 152 aa20.96■□□□□ 0.95
TSPAN9-208ENST00000640568 ZNF292O60281 2723 aa20.95■□□□□ 0.95
TSPAN9-208ENST00000640568 COPEO14579 308 aa20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 GLRA3O75311 464 aa20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 CSRP1P21291 193 aaKnown RBP20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 SHMT2P34897 504 aa20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 CCT5P48643 541 aa20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 EPHA4P54764 986 aa20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 NR1D2Q14995 579 aa20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 CCSMST1Q4G0I0 132 aa20.95■□□□□ 0.94
TSPAN9-208ENST00000640568 KLHL35Q6PF15 583 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms