RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TMEM220Q6QAJ8 160 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 ERN2Q76MJ5 926 aaKnown RBP21.54■■□□□ 1.04
PNKP-220ENST00000627232 KBTBD2Q8IY47 623 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 KLHDC8AQ8IYD2 350 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 L3MBTL4Q8NA19 623 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 FAM156AQ8NDB6 213 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 DUS3LQ96G46 650 aaKnown RBP21.54■■□□□ 1.04
PNKP-220ENST00000627232 ECSITQ9BQ95 431 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 HDAC8Q9BY41 377 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 DOCK8Q8NF50 2099 aa21.54■■□□□ 1.04
PNKP-220ENST00000627232 KCNE1BA0A087WTH5 132 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SERTM1A2A2V5 107 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 ASPDHA6ND91 283 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 ANKRD28O15084 1053 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SOD1P00441 154 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 C6P13671 934 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SLC2A4P14672 509 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 JAK1P23458 1154 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 MAP4P27816 1152 aaKnown RBP21.53■■□□□ 1.04
PNKP-220ENST00000627232 IL12AP29459 219 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 GNPDA1P46926 289 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 NFYCQ13952 458 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 RFTN2Q52LD8 501 aaPredicted RBP21.53■■□□□ 1.04
PNKP-220ENST00000627232 IZUMO2Q6UXV1 221 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 PRR23BQ6ZRT6 265 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SFTPA1Q8IWL2 248 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SLC15A3Q8IY34 581 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SLC22A15Q8IZD6 547 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 DPP10Q8N608 796 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 ATL1Q8WXF7 558 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SLC39A3Q9BRY0 314 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 KLHL4Q9C0H6 718 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 PRSS16Q9NQE7 514 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 SNX6Q9UNH7 406 aa21.53■■□□□ 1.04
PNKP-220ENST00000627232 POLR3HQ9Y535 204 aaPredicted RBP21.53■■□□□ 1.04
PNKP-220ENST00000627232 PRSS51A0A1B0GVH4 220 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 C9JVG2 144 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 ARNTLO00327 626 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 NME4O00746 187 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 INPP4BO15327 924 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 LZTS3O60299 673 aaPredicted RBP21.52■■□□□ 1.04
PNKP-220ENST00000627232 CATP04040 527 aaKnown RBP21.52■■□□□ 1.04
PNKP-220ENST00000627232 G6PDP11413 515 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 PCSK2P16519 638 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 PSMC3P17980 439 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 SLC6A2P23975 617 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 IL12RB1P42701 662 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 CCR3P51677 355 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 BNIP2Q12982 314 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 IMPG1Q17R60 797 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 ZNF658BQ4V348 819 aaPredicted RBP21.52■■□□□ 1.04
PNKP-220ENST00000627232 IRAK1BP1Q5VVH5 260 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 SPATA24Q86W54 205 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 ZUFSPQ96AP4 578 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 LRCH3Q96II8 777 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 CCDC138Q96M89 665 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 HBEGFQ99075 208 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 PLA2G2FQ9BZM2 168 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 SLC28A3Q9HAS3 691 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 LRTM1Q9HBL6 345 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 COQ6Q9Y2Z9 468 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 PCDHA9Q9Y5H5 950 aa21.52■■□□□ 1.04
PNKP-220ENST00000627232 C15orf38-AP3S2A0A0A6YYH1 394 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 TMEM202A6NGA9 273 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 ARHGEF33A8MVX0 844 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 UGDHO60701 494 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 KAT7O95251 611 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 PRPH2P23942 346 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 GRIA2P42262 883 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 GPR1P46091 355 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 RPL38P63173 70 aaKnown RBP21.51■■□□□ 1.03
PNKP-220ENST00000627232 RHDQ02161 417 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 ZNF33BQ06732 778 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 HYAL1Q12794 435 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 ADGRE1Q14246 886 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 C6orf10Q5SRN2 563 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 OGFRL1Q5TC84 451 aaPredicted RBP21.51■■□□□ 1.03
PNKP-220ENST00000627232 FAM46CQ5VWP2 391 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 NEK5Q6P3R8 708 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 NUDT18Q6ZVK8 323 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 ARPINQ7Z6K5 226 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 RGL4Q8IZJ4 473 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 VPS33AQ96AX1 596 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 ELSPBP1Q96BH3 223 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 MUC13Q9H3R2 512 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 ACTL8Q9H568 366 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 IL1RL2Q9HB29 575 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 FARSBQ9NSD9 589 aaKnown RBP21.51■■□□□ 1.03
PNKP-220ENST00000627232 C1orf109Q9NX04 203 aa21.51■■□□□ 1.03
PNKP-220ENST00000627232 TCRBV3S1A0A5B6 114 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 NPIPB8E9PQR5 432 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 LIN7AO14910 233 aaPredicted RBP21.5■■□□□ 1.03
PNKP-220ENST00000627232 ABRQ12979 859 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 GRM2Q14416 872 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 TRIP10Q15642 601 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 PAGE3Q5JUK9 113 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 CACHD1Q5VU97 1274 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 NAIF1Q69YI7 327 aaPredicted RBP21.5■■□□□ 1.03
PNKP-220ENST00000627232 DHFR2Q86XF0 187 aa21.5■■□□□ 1.03
PNKP-220ENST00000627232 MMAAQ8IVH4 418 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms