RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 C2orf54Q08AI8 447 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 TMTC4Q5T4D3 741 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 UNC5AQ6ZN44 842 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 ZNF572Q7Z3I7 529 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-208ENST00000626828 ADGRF3Q8IZF5 1079 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-208ENST00000626828 PWWP2AQ96N64 755 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 OR6C1Q96RD1 312 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 CCNL2Q96S94 520 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-208ENST00000626828 SPRY4Q9C004 299 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 APMAPQ9HDC9 416 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 PDE7BQ9NP56 450 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 FBXO6Q9NRD1 293 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-208ENST00000626828 POMT2Q9UKY4 750 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 LHX6Q9UPM6 363 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 UTP11Q9Y3A2 253 aaKnown RBP16.24■□□□□ 0.19
UBE3D-208ENST00000626828 CHD6Q8TD26 2715 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 PIPSLA2A3N6 862 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 TP73O15350 636 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 TPBGLP0DKB5 382 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 ERVK-10P10266 1014 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 CDH3P22223 829 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 ATP5DP30049 168 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 SLC1A2P43004 574 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 TMPRSS3P57727 454 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 SH3BP2P78314 561 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 MRPS25P82663 173 aaKnown RBP16.23■□□□□ 0.19
UBE3D-208ENST00000626828 TGIF1Q15583 401 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 KYNUQ16719 465 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 HP1BP3Q5SSJ5 553 aaPredicted RBP16.23■□□□□ 0.19
UBE3D-208ENST00000626828 DUPD1Q68J44 220 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 KIAA0408Q6ZU52 694 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 UNC5BQ8IZJ1 945 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 D2HGDHQ8N465 521 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 ZBTB2Q8N680 514 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 C2CD4AQ8NCU7 369 aaPredicted RBP16.23■□□□□ 0.19
UBE3D-208ENST00000626828 MAGEC3Q8TD91 643 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 SKA2Q8WVK7 121 aaPredicted RBP16.23■□□□□ 0.19
UBE3D-208ENST00000626828 PMEPA1Q969W9 287 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 RAD51AP1Q96B01 352 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 FCRL4Q96PJ5 515 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 WDR70Q9NW82 654 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 ICKQ9UPZ9 632 aa16.23■□□□□ 0.19
UBE3D-208ENST00000626828 CELSR3Q9NYQ7 3312 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 SLC9B1P1A6NJY1 282 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 E7ESA3 106 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 KIF2AO00139 706 aaPredicted RBP16.22■□□□□ 0.19
UBE3D-208ENST00000626828 FGF5P12034 268 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 FOLR1P15328 257 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 CCNFP41002 786 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 CARSP49589 748 aaKnown RBP16.22■□□□□ 0.19
UBE3D-208ENST00000626828 ATP1A2P50993 1020 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 PDIA2Q13087 525 aaKnown RBP16.22■□□□□ 0.19
UBE3D-208ENST00000626828 TUBB2AQ13885 445 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 FRG1Q14331 258 aaKnown RBP16.22■□□□□ 0.19
UBE3D-208ENST00000626828 GBX1Q14549 363 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 TTLL9Q3SXZ7 439 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 ZNF549Q6P9A3 640 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 PPP1R3BQ86XI6 285 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 DCUN1D3Q8IWE4 304 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 ZNF592Q92610 1267 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 KCNJ9Q92806 393 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 INPP5DQ92835 1189 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 NKD1Q969G9 470 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 CERS2Q96G23 380 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 NRTNQ99748 197 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 TUBB2BQ9BVA1 445 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 RAB17Q9H0T7 212 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 DPH5Q9H2P9 285 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 PRORYQ9H606 182 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 SYTL2Q9HCH5 934 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 PPANQ9NQ55 473 aaKnown RBP16.22■□□□□ 0.19
UBE3D-208ENST00000626828 ACTR10Q9NZ32 417 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 GALPQ9UBC7 116 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 PILRAQ9UKJ1 303 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 RARRES3Q9UL19 164 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 CHMP2BQ9UQN3 213 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 BTRCQ9Y297 605 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 DHRS7Q9Y394 339 aa16.22■□□□□ 0.19
UBE3D-208ENST00000626828 TMEM184BQ9Y519 407 aaPredicted RBP16.22■□□□□ 0.19
UBE3D-208ENST00000626828 MATN4O95460 622 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 C1orf105O95561 183 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 CHRM5P08912 532 aaPredicted RBP16.21■□□□□ 0.19
UBE3D-208ENST00000626828 CD9P21926 228 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 MAP4P27816 1152 aaKnown RBP16.21■□□□□ 0.19
UBE3D-208ENST00000626828 SKIV2L2P42285 1042 aaKnown RBP16.21■□□□□ 0.19
UBE3D-208ENST00000626828 RAB28P51157 221 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 CLCN7P51798 805 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 MPP1Q00013 466 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 CAV1Q03135 178 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 VAC14Q08AM6 782 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 KIR2DS3Q14952 304 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBE3D-208ENST00000626828 MANEAQ5SRI9 462 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 TEDDM1Q5T9Z0 273 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 STEAP4Q687X5 459 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 UGT3A1Q6NUS8 523 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 CNSTQ6PJW8 725 aa16.21■□□□□ 0.19
UBE3D-208ENST00000626828 CCDC81Q6ZN84 652 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms