RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TCRBV7S3A2A0A539 114 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 A6NL46 340 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 AZIN1O14977 448 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 TGFB1P01137 390 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 MYCLP1P12525 358 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 LIMK2P53671 638 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 PRKAA2P54646 552 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 RPS14P62263 151 aaKnown RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 C2orf80Q0P641 193 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 NFATC4Q14934 902 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 GRAMD1BQ3KR37 738 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 GPAT3Q53EU6 434 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 HIBCHQ6NVY1 386 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 DRICH1Q6PGQ1 229 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 SYT13Q7L8C5 426 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 MDGA1Q8NFP4 955 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 STARD8Q92502 1023 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 TMEM125Q96AQ2 219 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 C3orf14Q9HBI5 128 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 ADAP2Q9NPF8 381 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 PIEZO1Q92508 2521 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 TPST1O60507 370 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 HEXBP07686 556 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 LINC00032P0C843 101 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 LBPP18428 481 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 CRATP43155 626 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NUDT2P50583 147 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 AP1S2P56377 157 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 CDK3Q00526 305 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF155Q12901 538 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 LRRC23Q53EV4 343 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NEK5Q6P3R8 708 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 C12orf40Q86WS4 652 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 MINDY1Q8N5J2 469 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 FRMD1Q8N878 549 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 OR9A1PQ8NGU1 263 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 BIRC7Q96CA5 298 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 CMTM5Q96DZ9 223 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ZFRQ96KR1 1074 aaKnown RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 BTBD9Q96Q07 612 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NR1H4Q96RI1 486 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 MGME1Q9BQP7 344 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 L2HGDHQ9H9P8 463 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 VCX3AQ9NNX9 186 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ANLNQ9NQW6 1124 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NUDT4Q9NZJ9 180 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 STOML1Q9UBI4 398 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF232Q9UNY5 417 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 WASF2Q9Y6W5 498 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 TTC3P53804 2025 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 AP2A2O94973 939 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NR2F1P10589 423 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 STC1P52823 247 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NAIF1Q69YI7 327 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 PNCKQ6P2M8 343 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 USP30Q70CQ3 517 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 AGBL5Q8NDL9 886 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 CENPIQ92674 756 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 SMIM14Q96QK8 99 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NDEL1Q9GZM8 345 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 TMEM168Q9H0V1 697 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 C19orf25Q9UFG5 118 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 MRTO4Q9UKD2 239 aaKnown RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 H0Y8X5 98 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 DFNA5O60443 496 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 KRT16P08779 473 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 IL4RP24394 825 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 PTPN5P54829 565 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ZXDAP98168 799 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ACY1Q03154 408 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 GPNMBQ14956 572 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ABHD13Q7L211 337 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 CNTD1Q8N815 330 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 SPPL2AQ8TCT8 520 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ADAMTS15Q8TE58 950 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 DTD2Q96FN9 168 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 CAAP1Q9H8G2 361 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 SLC39A1Q9NY26 324 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 PRSS38A1L453 326 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ERN1O75460 977 aaKnown RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 REM1O75628 298 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ANXA4P09525 319 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 IL10P22301 178 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 RPL3P39023 403 aaKnown RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 MDH1P40925 334 aaKnown RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 MNX1P50219 401 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 MAZP56270 477 aaKnown RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 BTN3A2P78410 334 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF252P-AS1Q0IIN9 211 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 BIKQ13323 160 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 PRKD1Q15139 912 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 PTCHD3Q3KNS1 767 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 PSAPL1Q6NUJ1 521 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 DUS1LQ6P1R4 473 aaKnown RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 WDR93Q6P2C0 686 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 TMC8Q8IU68 726 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ACMSDQ8TDX5 336 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 EEF1AKMT1Q8WVE0 214 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms