RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PLET1Q6UQ28 207 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 CES3Q6UWW8 571 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 ZNF534Q76KX8 674 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 ZNF467Q7Z7K2 595 aaPredicted RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 CCDC190Q86UF4 302 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 C7orf61Q8IZ16 206 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 OR7G3Q8NG95 312 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 LRRN4Q8WUT4 740 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 PCNPQ8WW12 178 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 ZNF606Q8WXB4 792 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 ASB15Q8WXK1 588 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 GMCL1Q96IK5 515 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 FAM84AQ96KN4 292 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 ZDHHC15Q96MV8 337 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 MBOAT4Q96T53 435 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 SDHCQ99643 169 aaPredicted RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 RBBP8Q99708 897 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 RBM4BQ9BQ04 359 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 RBM4Q9BWF3 364 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 NXF2Q9GZY0 626 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 RACGAP1Q9H0H5 632 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 CATSPERZQ9NTU4 200 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 ANKEF1Q9NU02 776 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 BFARQ9NZS9 450 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 RUVBL2Q9Y230 463 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 SESN1Q9Y6P5 492 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 ZNFX1Q9P2E3 1918 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 SLC16A4O15374 487 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 HUS1O60921 280 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 RECQL5O94762 991 aaPredicted RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 RPLP0P05388 317 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 POLBP06746 335 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 LTA4HP09960 611 aaKnown RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 HNRNPLP14866 589 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS11-209ENST00000622309 ARSAP15289 507 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 TNNI1P19237 187 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 SLC6A2P23975 617 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 RYKP34925 604 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 NUP62P37198 522 aaPredicted RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 LIMK2P53671 638 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 Q3ZCU0 254 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 PYCR3Q53H96 274 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 MPP7Q5T2T1 576 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 STRIP1Q5VSL9 837 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 KLHL17Q6TDP4 642 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 SPESP1Q6UW49 350 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 RASGRP3Q8IV61 690 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 CCDC36Q8IYA8 594 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 GDPD1Q8N9F7 314 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 WDR48Q8TAF3 677 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 LRRC58Q96CX6 371 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 CERS2Q96G23 380 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 NAT9Q9BTE0 207 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 CEP41Q9BYV8 373 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 CLEC4MQ9H2X3 399 aaPredicted RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 MTMR10Q9NXD2 777 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 GTF2IRD1Q9UHL9 959 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 GLS2Q9UI32 602 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 ELF5Q9UKW6 265 aaPredicted RBP7.77□□□□□ -1.17
VPS11-209ENST00000622309 SLC39A10Q9ULF5 831 aa7.77□□□□□ -1.17
VPS11-209ENST00000622309 NRCAMQ92823 1304 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TRIM3O75382 744 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 IFNA7P01567 189 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CDK1P06493 297 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 FCER2P06734 321 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SUPT20HL2P0C7V6 817 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SNHG28P0DPA3 235 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SLC2A3P11169 496 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TGFBR2P37173 567 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ETV6P41212 452 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 RAB25P57735 213 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CUL2Q13617 745 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 FAM160B1Q5W0V3 765 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 XRRA1Q6P2D8 792 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TIGD4Q8IY51 512 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 DAW1Q8N136 415 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ARRDC4Q8NCT1 418 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 BPIFB1Q8TDL5 484 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ISL2Q96A47 359 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 LENG9Q96B70 501 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 MTFMTQ96DP5 389 aaKnown RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 ZSWIM3Q96MP5 696 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 Q96MT0 163 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 FAM129BQ96TA1 746 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 MLPHQ9BV36 600 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 RANBP3Q9H6Z4 567 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 PAK6Q9NQU5 681 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 MAP10Q9P2G4 905 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CDH9Q9ULB4 789 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TRAPPC4Q9Y296 219 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SCN4AP35499 1836 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SCN9AQ15858 1988 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 A0A1W2PQ09 198 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 B4DXG7 233 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SYN3O14994 580 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ZNF623O75123 536 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CYP11A1P05108 521 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SFTPCP11686 197 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SRCP12931 536 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 POU1F1P28069 291 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms