RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 REM1O75628 298 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CLDN7O95471 211 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 LDOC1O95751 146 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF30P17039 623 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 IGFBP5P24593 272 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 HYAL2Q12891 473 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 LY6G5CQ5SRR4 150 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CDCA2Q69YH5 1023 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 FBXO42Q6P3S6 717 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 FAM92BQ6ZTR7 304 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 SLC51AQ86UW1 340 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 AMER2Q8N7J2 671 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 PLA2G15Q8NCC3 412 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 SLC25A36Q96CQ1 311 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 KMOO15229 486 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 FAM163BP0C2L3 166 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 MSX2P35548 267 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CCNHP51946 323 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 RPL6Q02878 288 aaKnown RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 LCN1P1Q5VSP4 162 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 NCBP2-AS2Q69YL0 99 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 HFE2Q6ZVN8 426 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 TMEM156Q8N614 296 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 DNAAF2Q9NVR5 837 aaKnown RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 SNX7Q9UNH6 387 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ELOA3DA6NLF2 546 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CASKO14936 926 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 RSL1D1O76021 490 aaKnown RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 PGM3O95394 542 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 METTL18O95568 372 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CYB5AP00167 134 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 SERPINA1P01009 418 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 RHOP08100 348 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 PDK3Q15120 406 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ELOA3BQ3SY89 546 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 VWA5B1Q5TIE3 1220 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 SLC22A15Q8IZD6 547 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 SFRP1Q8N474 314 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ELOA3Q8NG57 546 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 EFHD2Q96C19 240 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CRELD1Q96HD1 420 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 FANCFQ9NPI8 374 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 CLEC4AQ9UMR7 237 aa11.17□□□□□ -0.62
CLIP1-219ENST00000620786 ERI3O43414 337 aaKnown RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 HCRTO43612 131 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 CCNB2O95067 398 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ZBTB11O95625 1053 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 MNDAP41218 407 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 VEGFBP49765 207 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 LIPEQ05469 1076 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF846Q147U1 533 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 MAPK14Q16539 360 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 MS4A13Q5J8X5 152 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 LRRC66Q68CR7 880 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 TTC27Q6P3X3 843 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 PAOXQ6QHF9 649 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF433Q8N7K0 673 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 OSBPL11Q9BXB4 747 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 BCAS3Q9H6U6 928 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 KLRF1Q9NZS2 232 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 IRAK3Q9Y616 596 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 NID2Q14112 1375 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 NIPSNAP2O75323 286 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 POP7O75817 140 aaKnown RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 TRAPPC6AO75865 159 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 TGFB1P01137 390 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 DRD4P21917 467 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 RPS14P62263 151 aaKnown RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 PPP2R2BQ00005 443 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 SMARCD3Q6STE5 483 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 OR5T3Q8NGG3 340 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 DENND1AQ8TEH3 1009 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 PIGUQ9H490 435 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ITM2CQ9NQX7 267 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF282Q9UDV7 671 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 GNEQ9Y223 722 aaKnown RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 UNGP13051 313 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 PITRM1Q5JRX3 1037 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 PJA1Q8NG27 643 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 DCAKDQ8WVC6 231 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 OVCA2Q8WZ82 227 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 FATE1Q969F0 183 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ART5Q96L15 291 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 DUSP26Q9BV47 211 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 TFB2MQ9H5Q4 396 aaKnown RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 MARK1Q9P0L2 795 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 PLAGL1Q9UM63 463 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 NOX1Q9Y5S8 564 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 OAS3Q9Y6K5 1087 aaKnown RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 PEAK1Q9H792 1746 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 CPSF4LA6NMK7 179 aaKnown RBP11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ZNF726A6NNF4 738 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 A8MUI8 341 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 RGS20O76081 388 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 GALTP07902 379 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 ACADLP28330 430 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 HCAR3P49019 387 aa11.16□□□□□ -0.62
CLIP1-219ENST00000620786 CDH12P55289 794 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms