RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ADAM21Q9UKJ8 722 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 SLC6A14Q9UN76 642 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PSMD13Q9UNM6 376 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 ASF1AQ9Y294 204 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 PCDHGA5Q9Y5G8 931 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 HEBP2Q9Y5Z4 205 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 R4GN57 208 aa7.82□□□□□ -1.16
CPNE3-209ENST00000620393 ATXN2Q99700 1313 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF106Q9H2Y7 1883 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 TRBV23OR9-2A0A075B6M9 112 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 PABPN1LA6NDY0 278 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 A8MT66 165 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 SUPT3HB4E1H0 165 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 LMO7DNF2Z398 122 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 STX16-NPEPL1H3BU86 382 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 MYO1CO00159 1063 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 STX16O14662 325 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 KLF11O14901 512 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 TAPBPO15533 448 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 DFNA5O60443 496 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 SUPT3HO75486 399 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 PIAS2O75928 621 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 EPN2O95208 641 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 GUCA1CO95843 209 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 CELA2BP08218 269 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ANXA5P08758 320 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 FGF3P11487 239 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 F3P13726 295 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 GFAPP14136 432 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 XRCC1P18887 633 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 BGNP21810 368 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 GRK2P25098 689 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 NDUFS1P28331 727 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 GGT5P36269 586 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 SLC19A1P41440 591 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ARRB1P49407 418 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 HNMTP50135 292 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 NAGLUP54802 743 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ALDH18A1P54886 795 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 NFKB2Q00653 900 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 STX3Q13277 289 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 SHBQ15464 509 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 TCEA2Q15560 299 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 CHI3L2Q15782 390 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 LPAL2Q16609 132 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 PDK4Q16654 411 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF423Q2M1K9 1284 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 UNC50Q53HI1 259 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 LIPMQ5VYY2 423 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 OGFOD3Q6PK18 319 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 IL27RAQ6UWB1 636 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 RGS9BPQ6ZS82 235 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 RAB44Q7Z6P3 723 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 GKN2Q86XP6 184 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 TCAIMQ8N3R3 496 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 PTGR2Q8N8N7 351 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 OR5AR1Q8NGP9 310 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 OR9A1PQ8NGU1 263 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 OR5K2Q8NHB8 316 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 RAB3IL1Q8TBN0 382 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 LMX1AQ8TE12 382 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ZFPM2Q8WW38 1151 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ATL1Q8WXF7 558 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 RHBDF1Q96CC6 855 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 FBXL8Q96CD0 374 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 PHF21BQ96EK2 531 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 C12orf66Q96MD2 445 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 PKP4Q99569 1192 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ELF4Q99607 663 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 MECRQ9BV79 373 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 LRRC61Q9BV99 259 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 GATA5Q9BWX5 397 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 C1QTNF3Q9BXJ4 246 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 CAPS2Q9BXY5 557 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 TRIT1Q9H3H1 467 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 CCDC134Q9H6E4 229 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ARL15Q9NXU5 204 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 NCKIPSDQ9NZQ3 722 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF624Q9P2J8 865 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 POLG2Q9UHN1 485 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 RAB23Q9ULC3 237 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 TNPO3Q9Y5L0 923 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 CFAP20Q9Y6A4 193 aaKnown RBP7.81□□□□□ -1.16
CPNE3-209ENST00000620393 CSNK1G3Q9Y6M4 447 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 COLEC10Q9Y6Z7 277 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 DOCK9Q9BZ29 2069 aa7.81□□□□□ -1.16
CPNE3-209ENST00000620393 PLXNB3Q9ULL4 1909 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 KIR2DS5A0A0G2JLQ3 304 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 A0A0G2JNG1 304 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 A0A1B0GTQ1 180 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 NCF1BA6NI72 391 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 OR52A4PA6NMU1 304 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 NCF1CA8MVU1 366 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 KIR2DS3K7RE56 304 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 AQP9O43315 295 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 H2AFYO75367 372 aaKnown RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 S100BP04271 92 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 SERPINE1P05121 402 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 CFIP05156 583 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms