RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 TSPAN4O14817 238 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 SERPINB5P36952 375 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 DSC2Q02487 901 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 MGAT5Q09328 741 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 LRRC73Q5JTD7 316 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 TCTE1Q5JU00 501 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 C1orf185Q5T7R7 199 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 ITPRIPL1Q6GPH6 555 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 MFSD6LQ8IWD5 586 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 OR52N1Q8NH53 320 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 SPATA22Q8NHS9 363 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 RAB3IL1Q8TBN0 382 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 PDCD6IPQ8WUM4 868 aaKnown RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 TP53INP1Q96A56 240 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 CITED4Q96RK1 184 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 PHF7Q9BWX1 381 aaPredicted RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 CD320Q9NPF0 282 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 THG1LQ9NWX6 298 aaKnown RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 F8W8V4 182 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 ACAA1P09110 424 aaPredicted RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 RHOQP17081 205 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 COILP38432 576 aaPredicted RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 RUNX3Q13761 415 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 ATXN7L2Q5T6C5 722 aaPredicted RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 HMBOX1Q6NT76 420 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 CCDC117Q8IWD4 279 aaPredicted RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 C10orf53Q8N6V4 93 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 HJURPQ8NCD3 748 aaPredicted RBP11.85□□□□□ -0.51
SRRT-216ENST00000618262 ST8SIA2Q92186 375 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 VPS39Q96JC1 886 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 SMIM14Q96QK8 99 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 ACOX2Q99424 681 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 FAM83CQ9BQN1 747 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 FEM1AQ9BSK4 669 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 NT5MQ9NPB1 228 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 OR6C2Q9NZP2 312 aa11.85□□□□□ -0.51
SRRT-216ENST00000618262 NCF1BA6NI72 391 aaPredicted RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 NCF1CA8MVU1 366 aaPredicted RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 VSTM5A8MXK1 200 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 EVPLLA8MZ36 301 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 TARM1B6A8C7 271 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A9O60656 530 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 PSIP1O75475 530 aaKnown RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 MT-CYBP00156 380 aaPredicted RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 TP53P04637 393 aaPredicted RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 PGRP06401 933 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 RNF224P0DH78 156 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 THEGLP0DJG4 465 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 STMN1P16949 149 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A6P19224 532 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A1P22309 533 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A4P22310 534 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 GJA4P35212 333 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A3P35503 534 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A5P35504 534 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 XIAPP98170 497 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 PCDH1Q08174 1060 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 PEX6Q13608 980 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 HTR4Q13639 388 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 MPPE1Q53F39 396 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 HEATR6Q6AI08 1181 aaKnown RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 RAB12Q6IQ22 244 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 ERICH5Q6P6B1 374 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 LRRC6Q86X45 466 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 SRRM1Q8IYB3 904 aaKnown RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 ZBTB44Q8NCP5 570 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 LPCAT1Q8NF37 534 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 HUS1BQ8NHY5 278 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 TFB1MQ8WVM0 346 aaKnown RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 MROQ9BYG7 248 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A7Q9HAW7 530 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A10Q9HAW8 530 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 UGT1A8Q9HAW9 530 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 KLHL8Q9P2G9 620 aaPredicted RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 ARGFXA6NJG6 315 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 FOXO6A8MYZ6 492 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 TXNDC9O14530 226 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 DNALI1O14645 258 aaPredicted RBP11.84□□□□□ -0.51
SRRT-216ENST00000618262 GSK3AP49840 483 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 GPS1Q13098 491 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 CASC4Q6P4E1 433 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 C11orf88Q6PI97 169 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 OR5H6Q8NGV6 325 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 FAF2Q96CS3 445 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 PKP4Q99569 1192 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 MAU2Q9Y6X3 613 aa11.84□□□□□ -0.51
SRRT-216ENST00000618262 DENND4CQ5VZ89 1909 aa11.83□□□□□ -0.51
SRRT-216ENST00000618262 FAM221AA4D161 298 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 RNF103O00237 685 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 DGKGP49619 791 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 CDH4P55283 916 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 ALDH6A1Q02252 535 aaKnown RBP11.83□□□□□ -0.52
SRRT-216ENST00000618262 ITGADQ13349 1161 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 NOMO1Q15155 1222 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 TEAD4Q15561 434 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 SMAD2Q15796 467 aaKnown RBP11.83□□□□□ -0.52
SRRT-216ENST00000618262 UNC5AQ6ZN44 842 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 CNTD1Q8N815 330 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms