RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 KRT72Q14CN4 511 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 IRF4Q15306 451 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 PPP1R3AQ16821 1122 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 PLK5Q496M5 336 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 AASDHQ4L235 1098 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 TMEM259Q4ZIN3 620 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 CES4AQ5XG92 561 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 GTF2H2CQ6P1K8 395 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 GPRIN3Q6ZVF9 776 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 CLNKQ7Z7G1 428 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 CFAP206Q8IYR0 622 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 LSMEM2Q8N112 164 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 CCDC138Q96M89 665 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 ZNF382Q96SR6 550 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 SEMA4BQ9NPR2 832 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 ITM2CQ9NQX7 267 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 RIC8BQ9NVN3 520 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 PTBP2Q9UKA9 531 aaKnown RBP16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 PCTPQ9UKL6 214 aa16.4■□□□□ 0.22
TRAPPC3-210ENST00000617904 ZNF839A8K0R7 811 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 H0YHG0 523 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 GFYI3L273 518 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 SIX3O95343 332 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 SOD1P00441 154 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 HOXC4P09017 264 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 ESRRAP11474 423 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 ZNF8P17098 575 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 NDUFV2P19404 249 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 CALB2P22676 271 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 TRIM23P36406 574 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 CTSCP53634 463 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 BNIP1Q12981 228 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 PDCD2Q16342 344 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 DOK6Q6PKX4 331 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 FAM124AQ86V42 546 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 TP53I13Q8NBR0 393 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 TSTD1Q8NFU3 115 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 FAM174AQ8TBP5 190 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 HMGB4Q8WW32 186 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 CMTM5Q96DZ9 223 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 NSL1Q96IY1 281 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 NUF2Q9BZD4 464 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 SHCBP1LQ9BZQ2 653 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 DUSP15Q9H1R2 295 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 SMOC1Q9H4F8 434 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 SLC32A1Q9H598 525 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 FAM8A1Q9UBU6 413 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 SERGEFQ9UGK8 458 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 EBF1Q9UH73 591 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 EIF2B4Q9UI10 523 aaKnown RBP16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 ACSL5Q9ULC5 683 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 FIS1Q9Y3D6 152 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 PCDHGA5Q9Y5G8 931 aa16.39■□□□□ 0.21
TRAPPC3-210ENST00000617904 ANTXRLA6NF34 631 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 CFAP73A6NFT4 308 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 K7ESM1 405 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 CHUKO15111 745 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 GRID2O43424 1007 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 PSIP1O75475 530 aaKnown RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 MATN4O95460 622 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 APBB3O95704 486 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 HMOX2P30519 316 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 CDH13P55290 713 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 STX1BP61266 288 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 ABRQ12979 859 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 KHDC1Q4VXA5 237 aaKnown RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 ZNF648Q5T619 568 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 CRTC3Q6UUV7 619 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 UNC5DQ6UXZ4 953 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 GALNT13Q8IUC8 556 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 TEX9Q8N6V9 391 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 FBXO15Q8NCQ5 510 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 ACTRT2Q8TDY3 377 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 AGAP11Q8TF27 550 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 RHBDF1Q96CC6 855 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 FBXL8Q96CD0 374 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 CCDC97Q96F63 343 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 RAB3IPQ96QF0 476 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 ZNHIT2Q9UHR6 403 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 ADAMTS6Q9UKP5 1117 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 ZFR2Q9UPR6 939 aaKnown RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 PDE10AQ9Y233 779 aa16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 RRP15Q9Y3B9 282 aaKnown RBP16.38■□□□□ 0.21
TRAPPC3-210ENST00000617904 PLXNB3Q9ULL4 1909 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 E2F3O00716 465 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 SGTAO43765 313 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 UNC5CO95185 931 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 SEMA4FO95754 770 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 SLC35G4P0C7Q5 338 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 GABRG2P18507 467 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 HNRNPA2B1P22626 353 aaKnown RBP16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 GGT5P36269 586 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 HSD17B2P37059 387 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 MPLP40238 635 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 TPMTP51580 245 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 HK3P52790 923 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 INHBCP55103 352 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 YPEL5P62699 121 aa16.37■□□□□ 0.21
TRAPPC3-210ENST00000617904 MAPRE2Q15555 327 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms