RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 Q8NA96 180 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 GLIS1Q8NBF1 620 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 TTC13Q8NBP0 860 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 ELMO1Q92556 727 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 OR2A14Q96R47 310 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 MFRPQ9BY79 579 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 LRRC4CQ9HCJ2 640 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 SPHK1Q9NYA1 384 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 G3BP2Q9UN86 482 aaKnown RBP20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 PACSIN2Q9UNF0 486 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 ASF1AQ9Y294 204 aa20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 R3HDM2Q9Y2K5 976 aaKnown RBP20.08■□□□□ 0.81
TRAPPC3-208ENST00000616074 MROH6A6NGR9 719 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 AGFG2O95081 481 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 TPBGLP0DKB5 382 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 CBSLP0DN79 551 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 PSMA3P25788 255 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 SHMT2P34897 504 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 CBSP35520 551 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 GABRA4P48169 554 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 RRADP55042 308 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 KLF1Q13351 362 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 ITIH4Q14624 930 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 INPP5JQ15735 1006 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 P3H1Q32P28 736 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 FHL5Q5TD97 284 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 RAB43Q86YS6 212 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 RBMXL3Q8N7X1 1067 aaKnown RBP20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 FLVCR1-AS1Q8TAF5 88 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 N4BP2L2Q92802 583 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 TCTN2Q96GX1 697 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 ALS2CR12Q96Q35 445 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 TMEM121Q9BTD3 319 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 DHRS4Q9BTZ2 278 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 SPRTNQ9H040 489 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 GPR83Q9NYM4 423 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 AMFRQ9UKV5 643 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 PADI2Q9Y2J8 665 aa20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 TDRKHQ9Y2W6 561 aaKnown RBP20.07■□□□□ 0.8
TRAPPC3-208ENST00000616074 QSOX1O00391 747 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 KLF7O75840 302 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 OR2B3O76000 313 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 FTH1P02794 183 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 CTSBP07858 339 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 CHRM5P08912 532 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 OTX2P32243 289 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 FOXN2P32314 431 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 RAPSNQ13702 412 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 CCDC38Q502W7 563 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 C1orf189Q5VU69 101 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 SLC6A19Q695T7 634 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 PACS1Q6VY07 963 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 PEX26Q7Z412 305 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 TBC1D21Q8IYX1 336 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 OR5K2Q8NHB8 316 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 SLC35B2Q8TB61 432 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 SMAD5Q99717 465 aaKnown RBP20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 PLAGL1Q9UM63 463 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 ESPL1Q14674 2120 aa20.06■□□□□ 0.8
TRAPPC3-208ENST00000616074 TEX15Q9BXT5 2789 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 A0A0J9YY10 115 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 TCRBV7S2A1N4TA0A589 114 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 SLC5A10A0PJK1 596 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 CCDC162PA2VCL2 907 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 BHMG1C9JSJ3 638 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 ATXN8OSP0DMR3 200 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 ZNF75DP51815 510 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 MLIPQ5VWP3 458 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 RHBDD2Q6NTF9 364 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 MRGPREQ86SM8 312 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 HPS6Q86YV9 775 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 UBL4BQ8N7F7 174 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 OR52K1Q8NGK4 314 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 SGSM3Q96HU1 749 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 GBP5Q96PP8 586 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 SLAMF7Q9NQ25 335 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 POLG2Q9UHN1 485 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 AP1M2Q9Y6Q5 423 aa20.05■□□□□ 0.8
TRAPPC3-208ENST00000616074 PSMD3O43242 534 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 PEBP1P30086 187 aaKnown RBP20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 SYTL3Q4VX76 610 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 HIST2H2BCQ6DN03 193 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 OR13J1Q8NGT2 312 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 PNPLA2Q96AD5 504 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 MRFAP1L1Q96HT8 127 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 C17orf62Q9BQA9 187 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 CHRNA10Q9GZZ6 450 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 OR6C2Q9NZP2 312 aa20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 DHCR7Q9UBM7 475 aaKnown RBP20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 PTRH2Q9Y3E5 179 aaKnown RBP20.04■□□□□ 0.8
TRAPPC3-208ENST00000616074 NUP210LQ5VU65 1888 aa20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 MIF4GDA9UHW6 222 aaKnown RBP20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 TCP11X1B4DZS4 312 aa20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 ZSCAN9O15535 394 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 OR1I1O60431 355 aa20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 SEMA7AO75326 666 aa20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 FTCDO95954 541 aa20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 OR56A5P0C7T3 313 aa20.03■□□□□ 0.8
TRAPPC3-208ENST00000616074 FOXL2P58012 376 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms