RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	OR5AR1	Q8NGP9	310 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	PROKR1	Q8TCW9	393 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	OR2A14	Q96R47	310 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	HGH1	Q9BTY7	390 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	FAM60A	Q9NP50	221 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	SMARCAL1	Q9NZC9	954 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	C5AR2	Q9P296	337 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	RIMKLB	Q9ULI2	386 aa		10.76	□□□□□ -0.69
CBWD1-222	ENST00000613508	CELSR2	Q9HCU4	2923 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	SPTB	P11277	2137 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	DOPEY1	Q5JWR5	2465 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	SLC5A10	A0PJK1	596 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	DDX3Y	O15523	660 aa	Known RBP	10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	OR2B3	O76000	313 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	IGHE	P01854	428 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	CHRM5	P08912	532 aa	Predicted RBP	10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	UGT2B7	P16662	529 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	TPH1	P17752	444 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	MSN	P26038	577 aa	Known RBP	10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	FOXN2	P32314	431 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	UQCRFS1	P47985	274 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	ZNF75D	P51815	510 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	NAP1L1	P55209	391 aa	Known RBP	10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	ACVR1	Q04771	509 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	ZIC1	Q15915	447 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	SLC5A12	Q1EHB4	618 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	FAM69B	Q5VUD6	431 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	LYPLAL1	Q5VWZ2	237 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	RAD9B	Q6WBX8	426 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	PEX26	Q7Z412	305 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	MRGPRE	Q86SM8	312 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	RAB43	Q86YS6	212 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	SYCE1	Q8N0S2	351 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508		Q8NA96	180 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	OR5K2	Q8NHB8	316 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	PNPLA2	Q96AD5	504 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	NACC2	Q96BF6	587 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	SGSM3	Q96HU1	749 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	GBP5	Q96PP8	586 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	ALS2CR12	Q96Q35	445 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	NUDT9	Q9BW91	350 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	XKR8	Q9H6D3	395 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	LRRC4C	Q9HCJ2	640 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	ENAM	Q9NRM1	1142 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	GPR83	Q9NYM4	423 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	AMFR	Q9UKV5	643 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	ASF1A	Q9Y294	204 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	PRSS21	Q9Y6M0	314 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	CRYBG3	Q68DQ2	2970 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	NOTCH2	Q04721	2471 aa		10.75	□□□□□ -0.69
CBWD1-222	ENST00000613508	PCSK5	Q92824	1860 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	ITPR2	Q14571	2701 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508		A0A0J9YY10	115 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	CCDC162P	A2VCL2	907 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	BLACE	A4D250	179 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508		F8W8V4	182 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	ZSCAN9	O15535	394 aa	Predicted RBP	10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	HCRTR1	O43613	425 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	KDM1A	O60341	852 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	KLHL41	O60662	606 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SUN1	O94901	812 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	GNLY	P22749	145 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	STIP1	P31948	543 aa	Known RBP	10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	GCGR	P47871	477 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	GDF10	P55107	478 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SOX8	P57073	446 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	ATP1A4	Q13733	1029 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SSPN	Q14714	243 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	KIR2DS3	Q14952	304 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	INPP5J	Q15735	1006 aa	Predicted RBP	10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	VWA5B1	Q5TIE3	1220 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SLC6A19	Q695T7	634 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	TLDC1	Q6P9B6	456 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	IGFL3	Q6UXB1	125 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	MICALCL	Q6ZW33	695 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	HOOK3	Q86VS8	718 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	DNAJC22	Q8N4W6	341 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	RBMXL3	Q8N7X1	1067 aa	Known RBP	10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	OR13J1	Q8NGT2	312 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	UBE2Q2	Q8WVN8	375 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	ELMO1	Q92556	727 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	PEX13	Q92968	403 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	HES6	Q96HZ4	224 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	RANBP9	Q96S59	729 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	TMEM121	Q9BTD3	319 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	AP1M1	Q9BXS5	423 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SLC7A5P2	Q9GIP4	190 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	KLHL25	Q9H0H3	589 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SPHK1	Q9NYA1	384 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SRPK3	Q9UPE1	567 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	SHANK1	Q9Y566	2161 aa		10.74	□□□□□ -0.69
CBWD1-222	ENST00000613508	PIKFYVE	Q9Y2I7	2098 aa		10.73	□□□□□ -0.69
CBWD1-222	ENST00000613508	TCRBV7S2A1N4T	A0A589	114 aa		10.73	□□□□□ -0.69
CBWD1-222	ENST00000613508	HEATR9	A2RTY3	570 aa		10.73	□□□□□ -0.69
CBWD1-222	ENST00000613508	ZNF185	O15231	689 aa		10.73	□□□□□ -0.69
CBWD1-222	ENST00000613508	AGFG2	O95081	481 aa		10.73	□□□□□ -0.69
CBWD1-222	ENST00000613508	ONECUT2	O95948	504 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms