RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KRR1Q13601 381 aaKnown RBP21.92■■□□□ 1.1
SHANK2-220ENST00000608988 ABRAXAS2Q15018 415 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 PGS1Q32NB8 556 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 RAP1GAP2Q684P5 730 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 LGALS12Q96DT0 336 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 FAM120BQ96EK7 910 aaKnown RBP21.92■■□□□ 1.1
SHANK2-220ENST00000608988 FUBP3Q96I24 572 aaKnown RBP eCLIP21.92■■□□□ 1.1
SHANK2-220ENST00000608988 RPRD1AQ96P16 312 aaPredicted RBP21.92■■□□□ 1.1
SHANK2-220ENST00000608988 KCNH6Q9H252 994 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 ACOT13Q9NPJ3 140 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 ZNF229Q9UJW7 825 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 Q9Y3F1 56 aa21.92■■□□□ 1.1
SHANK2-220ENST00000608988 TRIP12Q14669 1992 aaPredicted RBP21.91■■□□□ 1.1
SHANK2-220ENST00000608988 E5RI56 91 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 H7C0S8 307 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 NUAK1O60285 661 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 GLUD1P00367 558 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 SERPINA1P01009 418 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 IGLV3-27P01718 113 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 FTH1P02794 183 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 PFKLP17858 780 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 EFNA1P20827 205 aaPredicted RBP21.91■■□□□ 1.1
SHANK2-220ENST00000608988 PSMB9P28065 219 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 ACVRL1P37023 503 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 ARL1P40616 181 aaPredicted RBP21.91■■□□□ 1.1
SHANK2-220ENST00000608988 KPNA1P52294 538 aaPredicted RBP21.91■■□□□ 1.1
SHANK2-220ENST00000608988 FCGRTP55899 365 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 RPL38P63173 70 aaKnown RBP21.91■■□□□ 1.1
SHANK2-220ENST00000608988 UBE2UQ5VVX9 321 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 ANKRD34AQ69YU3 496 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 KDM4DQ6B0I6 523 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 TRIM46Q7Z4K8 759 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 SCN4BQ8IWT1 228 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 NPLOC4Q8TAT6 608 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 YME1L1Q96TA2 773 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 YIPF2Q9BWQ6 316 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 KLHL3Q9UH77 587 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 IFT52Q9Y366 437 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 DHRS7Q9Y394 339 aa21.91■■□□□ 1.1
SHANK2-220ENST00000608988 AXIN1O15169 862 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 GJB3O75712 270 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 MT-ND2P03891 347 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 PRKACGP22612 351 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 MAP2K4P45985 399 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 GNPDA1P46926 289 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 ABHD18Q0P651 414 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 AKAP14Q86UN6 197 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 TSPYL5Q86VY4 417 aaPredicted RBP21.9■■□□□ 1.1
SHANK2-220ENST00000608988 TMEM132CQ8N3T6 1108 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 MCFD2Q8NI22 146 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 ESAMQ96AP7 390 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 PSKH2Q96QS6 385 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 MAGEH1Q9H213 219 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 IKZF5Q9H5V7 419 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 SACM1LQ9NTJ5 587 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 UTS2RQ9UKP6 389 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 PCDHB1Q9Y5F3 818 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 GMPPBQ9Y5P6 360 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 OR2A25A4D2G3 310 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 PTTG1O95997 202 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 MASP1P48740 699 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 RING1Q06587 406 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 TMEM236Q5W0B7 351 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 PAGE2Q7Z2X7 111 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 SNX20Q7Z614 316 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 ZDHHC21Q8IVQ6 265 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 PGBD3Q8N328 593 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 RMDN1Q96DB5 314 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 ZHX1-C8orf76Q96EF9 292 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 AP5M1Q9H0R1 490 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 IPPKQ9H8X2 491 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 IL37Q9NZH6 218 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 TRPS1Q9UHF7 1281 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 NDRG4Q9ULP0 352 aaKnown RBP21.9■■□□□ 1.1
SHANK2-220ENST00000608988 PKP3Q9Y446 797 aa21.9■■□□□ 1.1
SHANK2-220ENST00000608988 SRCAPQ6ZRS2 3230 aa21.89■■□□□ 1.1
SHANK2-220ENST00000608988 PER2O15055 1255 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 GPR182O15218 404 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 CA12O43570 354 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 CCNDBP1O95273 360 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 FMO3P31513 532 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 MC4RP32245 332 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 CLK3P49761 638 aaKnown RBP21.89■■□□□ 1.09
SHANK2-220ENST00000608988 CLCN7P51798 805 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 EFEMP1Q12805 493 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 MAD2L1BPQ15013 274 aaPredicted RBP21.89■■□□□ 1.09
SHANK2-220ENST00000608988 TTLL9Q3SXZ7 439 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 SPANXN4Q5MJ08 99 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 VARS2Q5ST30 1063 aaKnown RBP21.89■■□□□ 1.09
SHANK2-220ENST00000608988 LDLRAD1Q5T700 205 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 OR2T5Q6IEZ7 315 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 DSG4Q86SJ6 1040 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 ABI1Q8IZP0 508 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 OR2T29Q8NH02 315 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 SLC38A4Q969I6 547 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 OR52E6Q96RD3 313 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 SIGLEC11Q96RL6 698 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 PITX2Q99697 317 aa21.89■■□□□ 1.09
SHANK2-220ENST00000608988 FAM20BO75063 409 aa21.88■■□□□ 1.09
SHANK2-220ENST00000608988 CNPP09543 421 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms