RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ZNF385CQ66K41 422 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 CDHR3Q6ZTQ4 885 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 LINC00523Q86TU6 105 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 IQCKQ8N0W5 287 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 TC2NQ8N9U0 490 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 PHC3Q8NDX5 983 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 CCDC110Q8TBZ0 833 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 PTERQ96BW5 349 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 NUDT9Q9BW91 350 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 FAM96AQ9H5X1 160 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 ITPR2Q14571 2701 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 AP2A1O95782 977 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 PDHA2P29803 388 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 NAP1L1P55209 391 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 PRKG2Q13237 762 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 MRPL49Q13405 166 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 KIR2DS3Q14952 304 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 FAM69BQ5VUD6 431 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 KCTD11Q693B1 232 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 SLC6A19Q695T7 634 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 PACS1Q6VY07 963 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 RBMXL3Q8N7X1 1067 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 C19orf47Q8N9M1 422 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 DNAJC1Q96KC8 554 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 C10orf88Q9H8K7 445 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 NDOR1Q9UHB4 597 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 ASF1AQ9Y294 204 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 B3GNT3Q9Y2A9 372 aa17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 EPN1Q9Y6I3 576 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-227ENST00000602011 SPTBP11277 2137 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 CENPEQ02224 2701 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 A6NL46 340 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 TCP11X1B4DZS4 312 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 DDX3YO15523 660 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 GAS8O95995 478 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 PTMAP06454 111 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 OR56A5P0C7T3 313 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 PIM1P11309 404 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 PPARGP37231 505 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 FOLR3P41439 243 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 ATP1A4Q13733 1029 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 MYBPC3Q14896 1274 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 EIF2S3LQ2VIR3 472 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 PTCHD3Q3KNS1 767 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 MLIPQ5VWP3 458 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 ZNF787Q6DD87 383 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 UNC5AQ6ZN44 842 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 CLDN19Q8N6F1 224 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 Q8NA96 180 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 OR2Y1Q8NGV0 311 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 OR5K2Q8NHB8 316 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 COG1Q8WTW3 980 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 SLC22A18Q96BI1 424 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 VPS50Q96JG6 964 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 OR2A14Q96R47 310 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 HGH1Q9BTY7 390 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 MFRPQ9BY79 579 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 CASS4Q9NQ75 786 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 TXLNGQ9NUQ3 528 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 SMARCAL1Q9NZC9 954 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 IFT80Q9P2H3 777 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 PLCL2Q9UPR0 1127 aa17.21■□□□□ 0.35
SHKBP1-227ENST00000602011 A0A0J9YY10 115 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 MROH6A6NGR9 719 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 ERI2A8K979 691 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 ZSCAN9O15535 394 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 ACADLP28330 430 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 ARSFP54793 590 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 SLC5A12Q1EHB4 618 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 DCAF10Q5QP82 559 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 YOD1Q5VVQ6 348 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 MRGPREQ86SM8 312 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 GALNT16Q8N428 558 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 NAT14Q8WUY8 206 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 DLG3Q92796 817 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 GBP5Q96PP8 586 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 PANX2Q96RD6 677 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 NDC1Q9BTX1 674 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 TSSK1BQ9BXA7 367 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 ATP13A2Q9NQ11 1180 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 RIMKLBQ9ULI2 386 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 ICKQ9UPZ9 632 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 HIVEP3Q5T1R4 2406 aa17.2■□□□□ 0.34
SHKBP1-227ENST00000602011 H3BMH7 237 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 FKBP9O95302 570 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 RPN2P04844 631 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 CHRM5P08912 532 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 PVRP15151 417 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 UGT2B7P16662 529 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 STIP1P31948 543 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 OTX2P32243 289 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 CDKN1CP49918 316 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 OLIG2Q13516 323 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 SPARCL1Q14515 664 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 DBN1Q16643 649 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 DNAJC21Q5F1R6 531 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms