RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 DNAAF3Q8N9W5 541 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 SLC38A9Q8NBW4 561 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 PPM1MQ96MI6 270 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 WDR83Q9BRX9 315 aaKnown RBP13.37□□□□□ -0.27
IRF3-225ENST00000600022 ZSCAN5AQ9BUG6 496 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 FSD1LQ9BXM9 530 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 ACTL8Q9H568 366 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 LHX9Q9NQ69 397 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 CASS4Q9NQ75 786 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 BFARQ9NZS9 450 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 POLHQ9Y253 713 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 MAD1L1Q9Y6D9 718 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 ZNF106Q9H2Y7 1883 aaKnown RBP13.37□□□□□ -0.27
IRF3-225ENST00000600022 ITPR2Q14571 2701 aa13.37□□□□□ -0.27
IRF3-225ENST00000600022 CELSR2Q9HCU4 2923 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 TLDC2A0PJX2 215 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 SDR42E2A6NKP2 422 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 AGPSO00116 658 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 TOX3O15405 576 aaPredicted RBP13.36□□□□□ -0.27
IRF3-225ENST00000600022 BUD23O43709 281 aaKnown RBP13.36□□□□□ -0.27
IRF3-225ENST00000600022 PMPCBO75439 489 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 RFPL1O75677 317 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 STX2P32856 288 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 ELK3P41970 407 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 CTSCP53634 463 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 WNT3AP56704 352 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 DCDC1P59894 354 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 LAMB3Q13751 1172 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 PTPRCAPQ14761 206 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
IRF3-225ENST00000600022 MSS51Q4VC12 460 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 AGBL2Q5U5Z8 902 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 PPP1R3BQ86XI6 285 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 CNPY4Q8N129 248 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 RIBC1Q8N443 379 aaPredicted RBP13.36□□□□□ -0.27
IRF3-225ENST00000600022 RASGEF1AQ8N9B8 481 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 IPMKQ8NFU5 416 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 OR2W6PQ8NHA6 318 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
IRF3-225ENST00000600022 CXorf40BQ96DE9 158 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 MRGPRX2Q96LB1 330 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 ATP6V1G3Q96LB4 118 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 NRTNQ99748 197 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 MAP3K3Q99759 626 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 TBL1YQ9BQ87 522 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 TIMM29Q9BSF4 260 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 TMBIM4Q9HC24 238 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 IL26Q9NPH9 171 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 ZC3H7BQ9UGR2 993 aaKnown RBP13.36□□□□□ -0.27
IRF3-225ENST00000600022 CHMP2BQ9UQN3 213 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 PCDHGA6Q9Y5G7 932 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 NFS1Q9Y697 457 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 CFAP20Q9Y6A4 193 aaKnown RBP13.36□□□□□ -0.27
IRF3-225ENST00000600022 IKBKGQ9Y6K9 419 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 CRYBG3Q68DQ2 2970 aa13.36□□□□□ -0.27
IRF3-225ENST00000600022 MED13Q9UHV7 2174 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 SEMA7AO75326 666 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 POP7O75817 140 aaKnown RBP13.35□□□□□ -0.27
IRF3-225ENST00000600022 SYF2O95926 243 aaKnown RBP13.35□□□□□ -0.27
IRF3-225ENST00000600022 CCNYL3P0C7X3 344 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 IDSP22304 550 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 GRIA1P42261 906 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 CHRNA4P43681 627 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 NPY2RP49146 381 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 IL10RAQ13651 578 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 RPE65Q16518 533 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 PRR30Q53SZ7 412 aaPredicted RBP13.35□□□□□ -0.27
IRF3-225ENST00000600022 HP1BP3Q5SSJ5 553 aaPredicted RBP13.35□□□□□ -0.27
IRF3-225ENST00000600022 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 ARMC3Q5W041 872 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 DUS1LQ6P1R4 473 aaKnown RBP13.35□□□□□ -0.27
IRF3-225ENST00000600022 WASH2PQ6VEQ5 465 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 TRAPPC5Q8IUR0 188 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
IRF3-225ENST00000600022 TTC30BQ8N4P2 665 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 ARFGAP2Q8N6H7 521 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 BEND7Q8N7W2 519 aaPredicted RBP13.35□□□□□ -0.27
IRF3-225ENST00000600022 FAM76AQ8TAV0 307 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 CFAP36Q96G28 342 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 SLC41A2Q96JW4 573 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 FICDQ9BVA6 458 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 EPB41L4BQ9H329 900 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 LRRC4CQ9HCJ2 640 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 WASH6PQ9NQA3 447 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 POT1Q9NUX5 634 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 SEMA5BQ9P283 1151 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 NFKBIL1Q9UBC1 381 aaPredicted RBP13.35□□□□□ -0.27
IRF3-225ENST00000600022 EPHA6Q9UF33 1036 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 KCND3Q9UK17 655 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 TEX264Q9Y6I9 313 aa13.35□□□□□ -0.27
IRF3-225ENST00000600022 MAGEB16A2A368 324 aa13.34□□□□□ -0.27
IRF3-225ENST00000600022 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
IRF3-225ENST00000600022 TTLL8A6PVC2 850 aa13.34□□□□□ -0.27
IRF3-225ENST00000600022 GPR89AB7ZAQ6 455 aa13.34□□□□□ -0.27
IRF3-225ENST00000600022 H3BQF6 201 aa13.34□□□□□ -0.27
IRF3-225ENST00000600022 POLR3GO15318 223 aaPredicted RBP13.34□□□□□ -0.27
IRF3-225ENST00000600022 VEGFDO43915 354 aa13.34□□□□□ -0.27
IRF3-225ENST00000600022 CDH16O75309 829 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms