RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ACSBG2Q5FVE4 666 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 RBM20Q5T481 1227 aaKnown RBP10.77□□□□□ -0.69
LIG1-211ENST00000596457 TTC23LQ6PF05 361 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 FBXO38Q6PIJ6 1188 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 C3orf62Q6ZUJ4 267 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 STRA8Q7Z7C7 330 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 AMIGO1Q86WK6 493 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 C2orf73Q8N5S3 287 aaPredicted RBP10.77□□□□□ -0.69
LIG1-211ENST00000596457 LMNTD1Q8N9Z9 388 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 AGBL5Q8NDL9 886 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 OR5K2Q8NHB8 316 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 USP7Q93009 1102 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 RNF31Q96EP0 1072 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 SLC46A1Q96NT5 459 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 MAP3K3Q99759 626 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 RHOXF2Q9BQY4 288 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 SLC39A1Q9NY26 324 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 COMMD10Q9Y6G5 202 aa10.77□□□□□ -0.69
LIG1-211ENST00000596457 A0A087WV48 116 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 BTN3A3O00478 584 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 BTN3A1O00481 513 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 HGSO14964 777 aaPredicted RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 TLX3O43711 291 aaPredicted RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 KDM1AO60341 852 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 C9P02748 559 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 RPN2P04844 631 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 FGF3P11487 239 aaPredicted RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 CDH3P22223 829 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 MCM3P25205 808 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 SLC5A2P31639 672 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 CLCN7P51798 805 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 KPNA2P52292 529 aaKnown RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 PGGT1BP53609 377 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 FOXM1Q08050 763 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 TTLL9Q3SXZ7 439 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 GLE1Q53GS7 698 aaKnown RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 UGT3A1Q6NUS8 523 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 UNC5DQ6UXZ4 953 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 LRRC69Q6ZNQ3 347 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 ARHGAP22Q7Z5H3 698 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 TAX1BP1Q86VP1 789 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 CNTN4Q8IWV2 1026 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 CTAGE3PQ8IX95 158 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 CPNE9Q8IYJ1 553 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 INPP5DQ92835 1189 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 ELMO2Q96JJ3 720 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 PPM1MQ96MI6 270 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 IL17FQ96PD4 163 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 CTRCQ99895 268 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 KLHL25Q9H0H3 589 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 TFB2MQ9H5Q4 396 aaKnown RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 LATS2Q9NRM7 1088 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 THSD1Q9NS62 852 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 PDP2Q9P2J9 529 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 MTRF1LQ9UGC7 380 aaKnown RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 TRMT6Q9UJA5 497 aaKnown RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 SLC39A10Q9ULF5 831 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 ICKQ9UPZ9 632 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 RAXQ9Y2V3 346 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 DHRS7Q9Y394 339 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 PCDHGA8Q9Y5G5 932 aa10.76□□□□□ -0.69
LIG1-211ENST00000596457 MN1Q10571 1320 aaPredicted RBP10.76□□□□□ -0.69
LIG1-211ENST00000596457 URB1O60287 2271 aaKnown RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 IGHV5-51A0A0C4DH38 117 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 PIPSLA2A3N6 862 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 KRT87PA6NCN2 255 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 CXorf49A8MYA2 514 aaPredicted RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 ISM1B1AKI9 464 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 RRP8O43159 456 aaKnown RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 PRAMEF10O60809 474 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 C1orf105O95561 183 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 SYF2O95926 243 aaKnown RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 TPBGLP0DKB5 382 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 SHMT2P34897 504 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 CDKN2DP55273 166 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 GPX6P59796 221 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 PDAP1Q13442 181 aaKnown RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 TSTA3Q13630 321 aaPredicted RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 TBC1D25Q3MII6 688 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 CCSMST1Q4G0I0 132 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 HECTD2Q5U5R9 776 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 KIAA0408Q6ZU52 694 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 DCUN1D3Q8IWE4 304 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 ADGRF3Q8IZF5 1079 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 LRRN4CLQ8ND94 238 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 GIMAP7Q8NHV1 300 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 CDKL2Q92772 493 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 KCNJ9Q92806 393 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 FGF11Q92914 225 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 MRRFQ96E11 262 aaKnown RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 ZNF578Q96N58 590 aaPredicted RBP10.75□□□□□ -0.69
LIG1-211ENST00000596457 TAAR9Q96RI9 348 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 ASCL3Q9NQ33 180 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 SMYD2Q9NRG4 433 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 ZDHHC18Q9NUE0 388 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 ABCF3Q9NUQ8 709 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 SOHLH2Q9NX45 425 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 TAS2R13Q9NYV9 303 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 ACTR10Q9NZ32 417 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 MOCS1Q9NZB8 636 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms