RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.77
LIG1-210ENST00000596332 PLAGL1Q9UM63 463 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 PDE10AQ9Y233 779 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 ASF1AQ9Y294 204 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 EXOC1LA0A1B0GW35 172 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 A0A1W2PPM1 405 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 FAM221BA6H8Z2 402 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 RHPN2P1A8MT19 583 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 F8W8V4 182 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 MYO1CO00159 1063 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 CDC7O00311 574 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 IFRD1O00458 451 aaPredicted RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 RPLP0P05388 317 aaKnown RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 TUBBP07437 444 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 SBK3P0C264 359 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 ENO3P13929 434 aaPredicted RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 CD1DP15813 335 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 SAT1P21673 171 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 MSH2P43246 934 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 IL2P60568 153 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 RAB10P61026 200 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 YBX1P67809 324 aaKnown RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 FASTKQ14296 549 aaKnown RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 TMED2Q15363 201 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 SYTL3Q4VX76 610 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 UGT3A1Q6NUS8 523 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 ARHGAP22Q7Z5H3 698 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 CLEC14AQ86T13 490 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 ISCA2Q86U28 154 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 CACTIN-AS1Q8N1I8 211 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 CHCHD4Q8N4Q1 142 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 DCBLD1Q8N8Z6 715 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 OR4E2Q8NGC2 313 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 CFAP61Q8NHU2 1237 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 UBLCP1Q8WVY7 318 aaPredicted RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 ANKRD7Q92527 254 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 PTERQ96BW5 349 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 PKP4Q99569 1192 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 HGH1Q9BTY7 390 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 TMEM109Q9BVC6 243 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 SLC12A9Q9BXP2 914 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 UNKQ9C0B0 810 aaKnown RBP10.26□□□□□ -0.77
LIG1-210ENST00000596332 ABCG4Q9H172 646 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 SEMA6CQ9H3T2 930 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 RDH14Q9HBH5 336 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 EVA1BQ9NVM1 165 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 ZNF358Q9NW07 568 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 SPHK1Q9NYA1 384 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 KCNK4Q9NYG8 393 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 EPHA6Q9UF33 1036 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 AKAP13Q12802 2813 aa10.26□□□□□ -0.77
LIG1-210ENST00000596332 IGHV5-10-1A0A0J9YXX1 117 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 PMS2P1A4D2B8 440 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 CCDC151A5D8V7 595 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 OR6C74A6NCV1 312 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 TRIM49D1C9J1S8 452 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 D6RAR5 112 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 BTN3A1O00481 513 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 RASGRF2O14827 1237 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 ZBTB14O43829 449 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 KIF1CO43896 1103 aaKnown RBP10.25□□□□□ -0.77
LIG1-210ENST00000596332 UBXN7O94888 489 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 PROS1P07225 676 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 CCDC166P0CW27 439 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 H2AFXP16104 143 aaPredicted RBP10.25□□□□□ -0.77
LIG1-210ENST00000596332 STMN1P16949 149 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 TYRP1P17643 537 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 NDUFS1P28331 727 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 PKLRP30613 574 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 GFERP55789 205 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 E2F1Q01094 437 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 ILF2Q12905 390 aaKnown RBP10.25□□□□□ -0.77
LIG1-210ENST00000596332 PDAP1Q13442 181 aaKnown RBP10.25□□□□□ -0.77
LIG1-210ENST00000596332 OR4D1Q15615 310 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 CYP2A13Q16696 494 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 TTLL9Q3SXZ7 439 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 TNFAIP8L3Q5GJ75 292 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 WDR74Q6RFH5 385 aaPredicted RBP10.25□□□□□ -0.77
LIG1-210ENST00000596332 MBOAT1Q6ZNC8 495 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 TMPRSS7Q7RTY8 843 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 DCUN1D3Q8IWE4 304 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 HMGCLL1Q8TB92 370 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 SH3KBP1Q96B97 665 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 NXNL1Q96CM4 212 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 SLC38A3Q99624 504 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.25□□□□□ -0.77
LIG1-210ENST00000596332 DERL2Q9GZP9 239 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 TRIT1Q9H3H1 467 aaKnown RBP10.25□□□□□ -0.77
LIG1-210ENST00000596332 GPAMQ9HCL2 828 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 POLG2Q9UHN1 485 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 ENTPD2Q9Y5L3 495 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 HEBP2Q9Y5Z4 205 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 COLEC10Q9Y6Z7 277 aa10.25□□□□□ -0.77
LIG1-210ENST00000596332 SPTBN2O15020 2390 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 A0A096LPK6 155 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 OR5K3A6NET4 321 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 TARM1B6A8C7 271 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms